Literature DB >> 18004666

Probing the equilibrium unfolding of ketosteroid isomerase through xenon-perturbed 1H-15N multidimensional NMR spectroscopy.

Hyeong Ju Lee1, Hye Seon Moon, Do Soo Jang, Hyung Jin Cha, Bee Hak Hong, Kwan Yong Choi, Hee Cheon Lee.   

Abstract

We used xenon-perturbed 1H-15N multidimensional NMR to investigate the structural changes in the urea-induced equilibrium unfolding of the dimeric ketosteroid isomerase (KSI) from Pseudomonas putida biotype B. Three limited regions located on the beta3-, beta5- and beta6-strands of dimeric interface were significantly perturbed by urea in the early stage of KSI unfolding, which could lead to dissociation of the dimer into structured monomers at higher denaturant concentration as the interactions in these regions are weakened. The results indicate that the use of xenon as an indirect probe for multidimensional NMR can be a useful method for the equilibrium unfolding study of protein at residue level.

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Year:  2007        PMID: 18004666     DOI: 10.1007/s10858-007-9209-z

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  29 in total

1.  Roles of dimerization in folding and stability of ketosteroid isomerase from Pseudomonas putida biotype B.

Authors:  D H Kim; G H Nam; D S Jang; S Yun; G Choi; H C Lee; K Y Choi
Journal:  Protein Sci       Date:  2001-04       Impact factor: 6.725

2.  CASTp: Computed Atlas of Surface Topography of proteins.

Authors:  T Andrew Binkowski; Shapor Naghibzadeh; Jie Liang
Journal:  Nucleic Acids Res       Date:  2003-07-01       Impact factor: 16.971

Review 3.  Enzymatic mechanisms for catalysis of enolization: ketosteroid isomerase.

Authors:  Ralph M Pollack
Journal:  Bioorg Chem       Date:  2004-10       Impact factor: 5.275

4.  Probing nature's knots: the folding pathway of a knotted homodimeric protein.

Authors:  Anna L Mallam; Sophie E Jackson
Journal:  J Mol Biol       Date:  2006-05-02       Impact factor: 5.469

5.  Predictability of weak binding from X-ray crystallography: inhaled anesthetics and myoglobin.

Authors:  J W Tanner; J S Johansson; P A Liebman; R G Eckenhoff
Journal:  Biochemistry       Date:  2001-04-24       Impact factor: 3.162

6.  Cavities in proteins: structure of a metmyoglobin-xenon complex solved to 1.9 A.

Authors:  R F Tilton; I D Kuntz; G A Petsko
Journal:  Biochemistry       Date:  1984-06-19       Impact factor: 3.162

7.  Overcoming the overlap problem in the assignment of 1H NMR spectra of larger proteins by use of three-dimensional heteronuclear 1H-15N Hartmann-Hahn-multiple quantum coherence and nuclear Overhauser-multiple quantum coherence spectroscopy: application to interleukin 1 beta.

Authors:  D Marion; P C Driscoll; L E Kay; P T Wingfield; A Bax; A M Gronenborn; G M Clore
Journal:  Biochemistry       Date:  1989-07-25       Impact factor: 3.162

8.  Hydrogen exchange studies of the Arc repressor: evidence for a monomeric folding intermediate.

Authors:  M J Burgering; M Hald; R Boelens; J N Breg; R Kaptein
Journal:  Biopolymers       Date:  1995-02       Impact factor: 2.505

9.  1H, 13C and 15N chemical shift referencing in biomolecular NMR.

Authors:  D S Wishart; C G Bigam; J Yao; F Abildgaard; H J Dyson; E Oldfield; J L Markley; B D Sykes
Journal:  J Biomol NMR       Date:  1995-09       Impact factor: 2.835

10.  Folding and association of an extremely stable dimeric protein from Sulfolobus islandicus.

Authors:  Markus Zeeb; Georg Lipps; Hauke Lilie; Jochen Balbach
Journal:  J Mol Biol       Date:  2004-02-06       Impact factor: 5.469

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