Literature DB >> 17994086

Imaging Drosophila gene activation and polymerase pausing in vivo.

John T Lis1.   

Abstract

Since the early 1960s, imaging studies of Drosophila sp. polytene chromosomes have provided unique views of gene transcription in vivo. The dramatic changes in chromatin structure that accompany gene activation can be visualized as chromosome puffs. Now, live-cell imaging techniques coupled with protein-DNA crosslinking assays on a genome-wide scale allow more detailed mechanistic questions to be addressed and are prompting the re-evaluation of models of transcription regulation in both Drosophila and mammals.

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Year:  2007        PMID: 17994086     DOI: 10.1038/nature06324

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   49.962


  42 in total

Review 1.  Controlling gene expression in response to stress.

Authors:  Eulàlia de Nadal; Gustav Ammerer; Francesc Posas
Journal:  Nat Rev Genet       Date:  2011-11-03       Impact factor: 53.242

2.  Vezf1 protein binding sites genome-wide are associated with pausing of elongating RNA polymerase II.

Authors:  Humaira Gowher; Kevin Brick; R Daniel Camerini-Otero; Gary Felsenfeld
Journal:  Proc Natl Acad Sci U S A       Date:  2012-01-30       Impact factor: 11.205

Review 3.  Inducible gene expression: diverse regulatory mechanisms.

Authors:  Vikki M Weake; Jerry L Workman
Journal:  Nat Rev Genet       Date:  2010-04-27       Impact factor: 53.242

4.  How are nucleosomes disrupted during transcription elongation?

Authors:  Jordanka Zlatanova; Jean-Marc Victor
Journal:  HFSP J       Date:  2009-11-12

5.  Spt6 enhances the elongation rate of RNA polymerase II in vivo.

Authors:  M Behfar Ardehali; Jie Yao; Karen Adelman; Nicholas J Fuda; Steven J Petesch; Watt W Webb; John T Lis
Journal:  EMBO J       Date:  2009-03-12       Impact factor: 11.598

Review 6.  Chromatin "pre-pattern" and epigenetic modulation in the cell fate choice of liver over pancreas in the endoderm.

Authors:  Cheng-Ran Xu; Kenneth S Zaret
Journal:  Nucleus       Date:  2012-03-01       Impact factor: 4.197

7.  Chromatin insulators specifically associate with different levels of higher-order chromatin organization in Drosophila.

Authors:  Heather A Wallace; Maria P Plata; Hyuck-Joon Kang; Misty Ross; Mariano Labrador
Journal:  Chromosoma       Date:  2009-12-23       Impact factor: 4.316

Review 8.  Transcriptional control of the inflammatory response.

Authors:  Ruslan Medzhitov; Tiffany Horng
Journal:  Nat Rev Immunol       Date:  2009-10       Impact factor: 53.106

9.  Transcription within condensed chromatin: Steric hindrance facilitates elongation.

Authors:  Christophe Bécavin; Maria Barbi; Jean-Marc Victor; Annick Lesne
Journal:  Biophys J       Date:  2010-03-03       Impact factor: 4.033

10.  Using ChIP-chip technology to reveal common principles of transcriptional repression in normal and cancer cells.

Authors:  Vitalina M Komashko; Luis G Acevedo; Sharon L Squazzo; Sushma S Iyengar; Alina Rabinovich; Henriette O'Geen; Roland Green; Peggy J Farnham
Journal:  Genome Res       Date:  2008-03-17       Impact factor: 9.043

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