Literature DB >> 17973343

WOMBAT: a tool for mixed model analyses in quantitative genetics by restricted maximum likelihood (REML).

Karin Meyer1.   

Abstract

WOMBAT is a software package for quantitative genetic analyses of continuous traits, fitting a linear, mixed model; estimates of covariance components and the resulting genetic parameters are obtained by restricted maximum likelihood. A wide range of models, comprising numerous traits, multiple fixed and random effects, selected genetic covariance structures, random regression models and reduced rank estimation are accommodated. WOMBAT employs up-to-date numerical and computational methods. Together with the use of efficient compilers, this generates fast executable programs, suitable for large scale analyses. Use of WOMBAT is illustrated for a bivariate analysis. The package consists of the executable program, available for LINUX and WINDOWS environments, manual and a set of worked example, and can be downloaded free of charge from (http://agbu. une.edu.au/~kmeyer/wombat.html).

Mesh:

Year:  2007        PMID: 17973343      PMCID: PMC2064953          DOI: 10.1631/jzus.2007.B0815

Source DB:  PubMed          Journal:  J Zhejiang Univ Sci B        ISSN: 1673-1581            Impact factor:   3.066


  2 in total

Review 1.  Estimation of quantitative genetic parameters.

Authors:  Robin Thompson; Sue Brotherstone; Ian M S White
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2005-07-29       Impact factor: 6.237

2.  Multivariate analyses of carcass traits for Angus cattle fitting reduced rank and factor analytic models.

Authors:  K Meyer
Journal:  J Anim Breed Genet       Date:  2007-04       Impact factor: 2.380

  2 in total
  126 in total

1.  "SNP Snappy": a strategy for fast genome-wide association studies fitting a full mixed model.

Authors:  Karin Meyer; Bruce Tier
Journal:  Genetics       Date:  2011-10-20       Impact factor: 4.562

2.  Genetic analysis and the estimates of genetic and phenotypic correlation of growth rates, Kleiber ratios, and fat-tail dimensions with birth to yearling live body weight traits in Makuie sheep.

Authors:  Shoja Jafari; Sarain Razzagzadeh
Journal:  Trop Anim Health Prod       Date:  2016-01-06       Impact factor: 1.559

3.  Feasibility of pedigree recording and genetic selection in village sheep flocks of smallholder farmers.

Authors:  Solomon Gizaw; Shenkute Goshme; Tesfaye Getachew; Aynalem Haile; Barbara Rischkowsky; Johan van Arendonk; Anne Valle-Zárate; Tadelle Dessie; Ally Okeyo Mwai
Journal:  Trop Anim Health Prod       Date:  2014-03-21       Impact factor: 1.559

4.  Mother-offspring and nest-mate resemblance but no heritability in early-life telomere length in white-throated dippers.

Authors:  Philipp J J Becker; Sophie Reichert; Sandrine Zahn; Johann Hegelbach; Sylvie Massemin; Lukas F Keller; Erik Postma; François Criscuolo
Journal:  Proc Biol Sci       Date:  2015-05-22       Impact factor: 5.349

5.  Dominance genetic variance for traits under directional selection in Drosophila serrata.

Authors:  Jacqueline L Sztepanacz; Mark W Blows
Journal:  Genetics       Date:  2015-03-16       Impact factor: 4.562

6.  Why does allometry evolve so slowly?

Authors:  David Houle; Luke T Jones; Ryan Fortune; Jacqueline L Sztepanacz
Journal:  Integr Comp Biol       Date:  2019-11-01       Impact factor: 3.326

7.  Genetic parameters and genome-wide association study regarding feed efficiency and slaughter traits in Charolais cows.

Authors:  Pauline Martin; Sébastien Taussat; Aurélie Vinet; Daniel Krauss; David Maupetit; Gilles Renand
Journal:  J Anim Sci       Date:  2019-09-03       Impact factor: 3.159

8.  Relationship between feed efficiency and slaughter traits of French Charolais bulls.

Authors:  Sébastien Taussat; Romain Saintilan; Daniel Krauss; David Maupetit; Marie-Noëlle Fouilloux; Gilles Renand
Journal:  J Anim Sci       Date:  2019-05-30       Impact factor: 3.159

9.  The comparative analysis of phenotypic and whole transcriptome gene expression data of ascites susceptible versus ascites resistant chickens.

Authors:  Karim Hasanpur; Mohammadreza Nassiri; Ghasem Hosseini Salekdeh
Journal:  Mol Biol Rep       Date:  2018-12-05       Impact factor: 2.316

10.  Genetic analysis on accumulated productivity and calving intervals in Nelore cattle.

Authors:  Daniela do Amaral Grossi; Mariana Piatto Berton; Marcos Eli Buzanskas; Tatiane Cristina Seleguim Chud; Natália Vinhal Grupioni; Claudia Cristina Paro de Paz; Raysildo Barbosa Lôbo; Danísio Prado Munari
Journal:  Trop Anim Health Prod       Date:  2015-09-19       Impact factor: 1.559

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.