Literature DB >> 17936923

Identification of PatL1, a human homolog to yeast P body component Pat1.

Nicoletta Scheller1, Patricia Resa-Infante, Susana de la Luna, Rui Pedro Galao, Mario Albrecht, Lars Kaestner, Peter Lipp, Thomas Lengauer, Andreas Meyerhans, Juana Díez.   

Abstract

In yeast, the activators of mRNA decapping, Pat1, Lsm1 and Dhh1, accumulate in processing bodies (P bodies) together with other proteins of the 5'-3'-deadenylation-dependent mRNA decay pathway. The Pat1 protein is of particular interest because it functions in the opposing processes of mRNA translation and mRNA degradation, thus suggesting an important regulatory role. In contrast to other components of this mRNA decay pathway, the human homolog of the yeast Pat1 protein was unknown. Here we describe the identification of two human PAT1 genes and show that one of them, PATL1, codes for an ORF with similar features as the yeast PAT1. As expected for a protein with a fundamental role in translation control, PATL1 mRNA was ubiquitously expressed in all human tissues as were the mRNAs of LSM1 and RCK, the human homologs of yeast LSM1 and DHH1, respectively. Furthermore, fluorescence-tagged PatL1 protein accumulated in distinct foci that correspond to P bodies, as they co-localized with the P body components Lsm1, Rck/p54 and the decapping enzyme Dcp1. In addition, as for its yeast counterpart, PatL1 expression was required for P body formation. Taken together, these data emphasize the conservation of important P body components from yeast to human cells.

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Year:  2007        PMID: 17936923     DOI: 10.1016/j.bbamcr.2007.08.009

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  32 in total

1.  The decapping activator HPat a novel factor co-purifying with GW182 from Drosophila cells.

Authors:  Elisabeth Jäger; Silke Dorner
Journal:  RNA Biol       Date:  2010-05-14       Impact factor: 4.652

Review 2.  P-bodies and stress granules: possible roles in the control of translation and mRNA degradation.

Authors:  Carolyn J Decker; Roy Parker
Journal:  Cold Spring Harb Perspect Biol       Date:  2012-09-01       Impact factor: 10.005

3.  Pat1 contains distinct functional domains that promote P-body assembly and activation of decapping.

Authors:  Guy R Pilkington; Roy Parker
Journal:  Mol Cell Biol       Date:  2007-12-17       Impact factor: 4.272

4.  Unraveling regulation and new components of human P-bodies through a protein interaction framework and experimental validation.

Authors:  Dinghai Zheng; Chyi-Ying A Chen; Ann-Bin Shyu
Journal:  RNA       Date:  2011-07-12       Impact factor: 4.942

Review 5.  Stress granules, P-bodies and cancer.

Authors:  Paul Anderson; Nancy Kedersha; Pavel Ivanov
Journal:  Biochim Biophys Acta       Date:  2014-12-05

6.  A Fluorescent Live Imaging Screening Assay Based on Translocation Criteria Identifies Novel Cytoplasmic Proteins Implicated in G Protein-coupled Receptor Signaling Pathways.

Authors:  Sandra Lecat; Hans W D Matthes; Rainer Pepperkok; Jeremy C Simpson; Jean-Luc Galzi
Journal:  Mol Cell Proteomics       Date:  2015-03-10       Impact factor: 5.911

7.  Role of Rck-Pat1b binding in assembly of processing-bodies.

Authors:  Sevim Ozgur; Georg Stoecklin
Journal:  RNA Biol       Date:  2013-03-27       Impact factor: 4.652

8.  Long non-coding RNAs: new players in ocular neovascularization.

Authors:  Xue-Dong Xu; Ke-Ran Li; Xiu-Miao Li; Jin Yao; Jiang Qin; Biao Yan
Journal:  Mol Biol Rep       Date:  2014-03-13       Impact factor: 2.316

9.  HPat provides a link between deadenylation and decapping in metazoa.

Authors:  Gabrielle Haas; Joerg E Braun; Cátia Igreja; Felix Tritschler; Tadashi Nishihara; Elisa Izaurralde
Journal:  J Cell Biol       Date:  2010-04-19       Impact factor: 10.539

10.  Translation and replication of hepatitis C virus genomic RNA depends on ancient cellular proteins that control mRNA fates.

Authors:  Nicoletta Scheller; Leonardo Bruno Mina; Rui Pedro Galão; Ashwin Chari; Mireia Giménez-Barcons; Amine Noueiry; Utz Fischer; Andreas Meyerhans; Juana Díez
Journal:  Proc Natl Acad Sci U S A       Date:  2009-07-23       Impact factor: 11.205

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