Literature DB >> 17918959

Ultrafast excited-state dynamics in the green fluorescent protein variant S65T/H148D. 1. Mutagenesis and structural studies.

Xiaokun Shu1, Karen Kallio, Xinghua Shi, Paul Abbyad, Pakorn Kanchanawong, William Childs, Steven G Boxer, S James Remington.   

Abstract

Wild type green fluorescent protein (wt-GFP) and the variant S65T/H148D each exhibit two absorption bands, A and B, which are associated with the protonated and deprotonated chromophores, respectively. Excitation of either band leads to green emission. In wt-GFP, excitation of band A ( approximately 395 nm) leads to green emission with a rise time of 10-15 ps, due to excited-state proton transfer (ESPT) from the chromophore hydroxyl group to an acceptor. This process produces an anionic excited-state intermediate I* that subsequently emits a green photon. In the variant S65T/H148D, the A band absorbance maximum is red-shifted to approximately 415 nm, and as detailed in the accompanying papers, when the A band is excited, green fluorescence appears with a rise time shorter than the instrument time resolution ( approximately 170 fs). On the basis of the steady-state spectroscopy and high-resolution crystal structures of several variants described herein, it is proposed that in S65T/H148D, the red shift of absorption band A and the ultrafast appearance of green fluorescence upon excitation of band A are due to a very short (<or=2.4 A), and possibly low-barrier, hydrogen bond between the chromophore hydroxyl and introduced Asp148.

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Year:  2007        PMID: 17918959      PMCID: PMC2536499          DOI: 10.1021/bi7009037

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  30 in total

1.  Nuclear magnetic resonance methods for the detection and study of low-barrier hydrogen bonds on enzymes.

Authors:  A S Mildvan; T K Harris; C Abeygunawardana
Journal:  Methods Enzymol       Date:  1999       Impact factor: 1.600

2.  Structural basis for understanding spectral variations in green fluorescent protein.

Authors:  S J Remington
Journal:  Methods Enzymol       Date:  2000       Impact factor: 1.600

3.  Rapid automated molecular replacement by evolutionary search.

Authors:  C R Kissinger; D K Gehlhaar; D B Fogel
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1999-02

4.  Green fluorescent protein variants as ratiometric dual emission pH sensors. 2. Excited-state dynamics.

Authors:  Tim B McAnaney; Eun Sun Park; George T Hanson; S James Remington; Steven G Boxer
Journal:  Biochemistry       Date:  2002-12-31       Impact factor: 3.162

Review 5.  The low barrier hydrogen bond in enzymatic catalysis.

Authors:  W W Cleland; P A Frey; J A Gerlt
Journal:  J Biol Chem       Date:  1998-10-02       Impact factor: 5.157

6.  Ultra-fast excited state dynamics in green fluorescent protein: multiple states and proton transfer.

Authors:  M Chattoraj; B A King; G U Bublitz; S G Boxer
Journal:  Proc Natl Acad Sci U S A       Date:  1996-08-06       Impact factor: 11.205

7.  Low-barrier hydrogen bonds and enzymic catalysis.

Authors:  W W Cleland; M M Kreevoy
Journal:  Science       Date:  1994-06-24       Impact factor: 47.728

8.  NMR evidence for the participation of a low-barrier hydrogen bond in the mechanism of delta 5-3-ketosteroid isomerase.

Authors:  Q Zhao; C Abeygunawardana; P Talalay; A S Mildvan
Journal:  Proc Natl Acad Sci U S A       Date:  1996-08-06       Impact factor: 11.205

9.  Kindling fluorescent protein from Anemonia sulcata: dark-state structure at 1.38 A resolution.

Authors:  Michael L Quillin; David M Anstrom; Xiaokun Shu; Shannon O'Leary; Karen Kallio; Dmitry M Chudakov; S James Remington
Journal:  Biochemistry       Date:  2005-04-19       Impact factor: 3.162

10.  Crystal structure of the Aequorea victoria green fluorescent protein.

Authors:  M Ormö; A B Cubitt; K Kallio; L A Gross; R Y Tsien; S J Remington
Journal:  Science       Date:  1996-09-06       Impact factor: 47.728

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  23 in total

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Authors:  My Hang V Huynh; Thomas J Meyer
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2.  Ultrafast excited-state dynamics in the green fluorescent protein variant S65T/H148D. 1. Mutagenesis and structural studies.

Authors:  Xiaokun Shu; Karen Kallio; Xinghua Shi; Paul Abbyad; Pakorn Kanchanawong; William Childs; Steven G Boxer; S James Remington
Journal:  Biochemistry       Date:  2007-10-06       Impact factor: 3.162

3.  Ultrafast Electronic and Vibrational Dynamics of Stabilized A State Mutants of the Green Fluorescent Protein (GFP): Snipping the Proton Wire.

Authors:  Deborah Stoner-Ma; Andrew A Jaye; Kate L Ronayne; Jerome Nappa; Peter J Tonge; Stephen R Meech
Journal:  Chem Phys       Date:  2008-06-23       Impact factor: 2.348

4.  Concerted electron-proton transfer in the optical excitation of hydrogen-bonded dyes.

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6.  Excited-state structural dynamics of a dual-emission calmodulin-green fluorescent protein sensor for calcium ion imaging.

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Journal:  Proc Natl Acad Sci U S A       Date:  2014-07-01       Impact factor: 11.205

Review 7.  Modern fluorescent proteins: from chromophore formation to novel intracellular applications.

Authors:  Olesya V Stepanenko; Olga V Stepanenko; Daria M Shcherbakova; Irina M Kuznetsova; Konstantin K Turoverov; Vladislav V Verkhusha
Journal:  Biotechniques       Date:  2011-11       Impact factor: 1.993

8.  Engineering ESPT pathways based on structural analysis of LSSmKate red fluorescent proteins with large Stokes shift.

Authors:  Kiryl D Piatkevich; Vladimir N Malashkevich; Steven C Almo; Vladislav V Verkhusha
Journal:  J Am Chem Soc       Date:  2010-08-11       Impact factor: 15.419

Review 9.  Chromophore chemistry of fluorescent proteins controlled by light.

Authors:  Daria M Shcherbakova; Vladislav V Verkhusha
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10.  Excited state proton transfer in the red fluorescent protein mKeima.

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Journal:  J Am Chem Soc       Date:  2009-09-23       Impact factor: 15.419

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