Literature DB >> 19708654

Excited state proton transfer in the red fluorescent protein mKeima.

J Nathan Henderson1, Maire F Osborn, Nayden Koon, Rinat Gepshtein, Dan Huppert, S James Remington.   

Abstract

mKeima is an unusual monomeric red fluorescent protein (lambda(em)(max) approximately 620 nm) that is maximally excited in the blue (lambda(ex)(max) approximately 440 nm). The large Stokes shift suggests that the chromophore is normally protonated. A 1.63 A resolution structure of mKeima reveals the chromophore to be imbedded in a novel hydrogen bond network, different than in GFP, which could support proton transfer from the chromophore hydroxyl, via Ser142, to Asp157. At low temperatures the emission contains a green component (lambda(em)(max) approximately 535 nm), enhanced by deuterium substitution, presumably resulting from reduced proton transfer efficiency. Ultrafast pump/probe studies reveal a rising component in the 610 nm emission with a lifetime of approximately 4 ps, characterizing the rate of proton transfer. Mutation of Asp157 to neutral Asn changes the chromophore resting charge state to anionic (lambda(ex)(max) approximately 565 nm, lambda(em)(max) approximately 620 nm). Thus, excited state proton transfer (ESPT) explains the large Stokes shift. This work unambiguously characterizes green emission from the protonated acylimine chromophore of red fluorescent proteins.

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Year:  2009        PMID: 19708654      PMCID: PMC2754865          DOI: 10.1021/ja904665x

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  27 in total

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2.  Ultrafast excited-state dynamics in the green fluorescent protein variant S65T/H148D. 2. Unusual photophysical properties.

Authors:  Xinghua Shi; Paul Abbyad; Xiaokun Shu; Karen Kallio; Pakorn Kanchanawong; William Childs; S James Remington; Steven G Boxer
Journal:  Biochemistry       Date:  2007-10-06       Impact factor: 3.162

3.  Structure and mechanism of the photoactivatable green fluorescent protein.

Authors:  J Nathan Henderson; Rinat Gepshtein; Josef R Heenan; Karen Kallio; Dan Huppert; S James Remington
Journal:  J Am Chem Soc       Date:  2009-04-01       Impact factor: 15.419

4.  Exploring the effects of intramolecular vibrational energy redistribution on the operation of the proton wire in green fluorescent protein.

Authors:  Oriol Vendrell; Ricard Gelabert; Miquel Moreno; José M Lluch
Journal:  J Phys Chem B       Date:  2008-09-30       Impact factor: 2.991

5.  Balance between ultrafast parallel reactions in the green fluorescent protein has a structural origin.

Authors:  Jasper J van Thor; Kate L Ronayne; Michael Towrie; J Timothy Sage
Journal:  Biophys J       Date:  2008-05-09       Impact factor: 4.033

6.  Reverse pH-dependence of chromophore protonation explains the large Stokes shift of the red fluorescent protein mKeima.

Authors:  Sebastien Violot; Philippe Carpentier; Laurent Blanchoin; Dominique Bourgeois
Journal:  J Am Chem Soc       Date:  2009-08-05       Impact factor: 15.419

7.  Refined crystal structure of DsRed, a red fluorescent protein from coral, at 2.0-A resolution.

Authors:  D Yarbrough; R M Wachter; K Kallio; M V Matz; S J Remington
Journal:  Proc Natl Acad Sci U S A       Date:  2001-01-16       Impact factor: 11.205

8.  Crystal structure of a new cyan fluorescent protein and its hue-shifted variants.

Authors:  Akihiro Kikuchi; Eiko Fukumura; Satoshi Karasawa; Yoshitsugu Shiro; Atsushi Miyawaki
Journal:  Biochemistry       Date:  2009-06-16       Impact factor: 3.162

9.  Ultrafast excited-state dynamics in the green fluorescent protein variant S65T/H148D. 3. Short- and long-time dynamics of the excited-state proton transfer.

Authors:  Pavel Leiderman; Liat Genosar; Dan Huppert; Xiaokun Shu; S James Remington; Kyril M Solntsev; Laren M Tolbert
Journal:  Biochemistry       Date:  2007-10-06       Impact factor: 3.162

10.  An alternate proton acceptor for excited-state proton transfer in green fluorescent protein: rewiring GFP.

Authors:  Deborah Stoner-Ma; Andrew A Jaye; Kate L Ronayne; Jérôme Nappa; Stephen R Meech; Peter J Tonge
Journal:  J Am Chem Soc       Date:  2008-01-08       Impact factor: 15.419

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  21 in total

1.  Imaging intracellular pH in live cells with a genetically encoded red fluorescent protein sensor.

Authors:  Mathew Tantama; Yin Pun Hung; Gary Yellen
Journal:  J Am Chem Soc       Date:  2011-06-09       Impact factor: 15.419

2.  Structure of the red fluorescent protein from a lancelet (Branchiostoma lanceolatum): a novel GYG chromophore covalently bound to a nearby tyrosine.

Authors:  Vladimir Z Pletnev; Nadya V Pletneva; Konstantin A Lukyanov; Ekaterina A Souslova; Arkady F Fradkov; Dmitry M Chudakov; Tatyana Chepurnykh; Ilia V Yampolsky; Alexander Wlodawer; Zbigniew Dauter; Sergei Pletnev
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2013-08-17

Review 3.  Green fluorescent protein: a perspective.

Authors:  S James Remington
Journal:  Protein Sci       Date:  2011-07-19       Impact factor: 6.725

4.  Monomerization of far-red fluorescent proteins.

Authors:  Timothy M Wannier; Sarah K Gillespie; Nicholas Hutchins; R Scott McIsaac; Sheng-Yi Wu; Yi Shen; Robert E Campbell; Kevin S Brown; Stephen L Mayo
Journal:  Proc Natl Acad Sci U S A       Date:  2018-11-13       Impact factor: 11.205

Review 5.  Modern fluorescent proteins: from chromophore formation to novel intracellular applications.

Authors:  Olesya V Stepanenko; Olga V Stepanenko; Daria M Shcherbakova; Irina M Kuznetsova; Konstantin K Turoverov; Vladislav V Verkhusha
Journal:  Biotechniques       Date:  2011-11       Impact factor: 1.993

6.  Engineering ESPT pathways based on structural analysis of LSSmKate red fluorescent proteins with large Stokes shift.

Authors:  Kiryl D Piatkevich; Vladimir N Malashkevich; Steven C Almo; Vladislav V Verkhusha
Journal:  J Am Chem Soc       Date:  2010-08-11       Impact factor: 15.419

7.  Monomeric red fluorescent proteins with a large Stokes shift.

Authors:  Kiryl D Piatkevich; James Hulit; Oksana M Subach; Bin Wu; Arian Abdulla; Jeffrey E Segall; Vladislav V Verkhusha
Journal:  Proc Natl Acad Sci U S A       Date:  2010-03-08       Impact factor: 11.205

Review 8.  Chromophore chemistry of fluorescent proteins controlled by light.

Authors:  Daria M Shcherbakova; Vladislav V Verkhusha
Journal:  Curr Opin Chem Biol       Date:  2014-05-13       Impact factor: 8.822

9.  Spectral and structural analysis of large Stokes shift fluorescent protein dKeima570.

Authors:  Yongbin Xu; Kwang Yeon Hwang; Ki Hyun Nam
Journal:  J Microbiol       Date:  2018-10-24       Impact factor: 3.422

Review 10.  Beta-barrel scaffold of fluorescent proteins: folding, stability and role in chromophore formation.

Authors:  Olesya V Stepanenko; Olga V Stepanenko; Irina M Kuznetsova; Vladislav V Verkhusha; Konstantin K Turoverov
Journal:  Int Rev Cell Mol Biol       Date:  2013       Impact factor: 6.813

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