Literature DB >> 17913886

Kinetic insulation as an effective mechanism for achieving pathway specificity in intracellular signaling networks.

Marcelo Behar1, Henrik G Dohlman, Timothy C Elston.   

Abstract

Intracellular signaling pathways that share common components often elicit distinct physiological responses. In most cases, the biochemical mechanisms responsible for this signal specificity remain poorly understood. Protein scaffolds and cross-inhibition have been proposed as strategies to prevent unwanted cross-talk. Here, we report a mechanism for signal specificity termed "kinetic insulation." In this approach signals are selectively transmitted through the appropriate pathway based on their temporal profile. In particular, we demonstrate how pathway architectures downstream of a common component can be designed to efficiently separate transient signals from signals that increase slowly over time. Furthermore, we demonstrate that upstream signaling proteins can generate the appropriate input to the common pathway component regardless of the temporal profile of the external stimulus. Our results suggest that multilevel signaling cascades may have evolved to modulate the temporal profile of pathway activity so that stimulus information can be efficiently encoded and transmitted while ensuring signal specificity.

Mesh:

Substances:

Year:  2007        PMID: 17913886      PMCID: PMC2042176          DOI: 10.1073/pnas.0703894104

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  28 in total

1.  Mathematical models of protein kinase signal transduction.

Authors:  Reinhart Heinrich; Benjamin G Neel; Tom A Rapoport
Journal:  Mol Cell       Date:  2002-05       Impact factor: 17.970

2.  Selectivity in overlapping MAP kinase cascades.

Authors:  Oscar J G Somsen; Marco Siderius; Florian F Bauer; Jacky L Snoep; Hans V Westerhoff
Journal:  J Theor Biol       Date:  2002-10-07       Impact factor: 2.691

Review 3.  Crosstalk of oncogenic and prostanoid signaling pathways.

Authors:  Rolf Müller
Journal:  J Cancer Res Clin Oncol       Date:  2004-06-15       Impact factor: 4.553

4.  Mathematical and computational analysis of adaptation via feedback inhibition in signal transduction pathways.

Authors:  Marcelo Behar; Nan Hao; Henrik G Dohlman; Timothy C Elston
Journal:  Biophys J       Date:  2007-05-18       Impact factor: 4.033

Review 5.  G proteins and pheromone signaling.

Authors:  Henrik G Dohlman
Journal:  Annu Rev Physiol       Date:  2002       Impact factor: 19.318

6.  An amplified sensitivity arising from covalent modification in biological systems.

Authors:  A Goldbeter; D E Koshland
Journal:  Proc Natl Acad Sci U S A       Date:  1981-11       Impact factor: 11.205

Review 7.  Osmotic stress signaling and osmoadaptation in yeasts.

Authors:  Stefan Hohmann
Journal:  Microbiol Mol Biol Rev       Date:  2002-06       Impact factor: 11.056

8.  Unique and redundant roles for HOG MAPK pathway components as revealed by whole-genome expression analysis.

Authors:  Sean M O'Rourke; Ira Herskowitz
Journal:  Mol Biol Cell       Date:  2003-10-31       Impact factor: 4.138

9.  Ultrasensitivity in the mitogen-activated protein kinase cascade.

Authors:  C Y Huang; J E Ferrell
Journal:  Proc Natl Acad Sci U S A       Date:  1996-09-17       Impact factor: 11.205

Review 10.  Learning from yeasts: intracellular sensing of stress conditions.

Authors:  Mariano Gacto; Teresa Soto; Jero Vicente-Soler; Tomás G Villa; José Cansado
Journal:  Int Microbiol       Date:  2003-07-26       Impact factor: 2.479

View more
  39 in total

1.  Sensitivity control through attenuation of signal transfer efficiency by negative regulation of cellular signalling.

Authors:  Yu Toyoshima; Hiroaki Kakuda; Kazuhiro A Fujita; Shinsuke Uda; Shinya Kuroda
Journal:  Nat Commun       Date:  2012-03-13       Impact factor: 14.919

2.  Data-driven modelling of receptor tyrosine kinase signalling networks quantifies receptor-specific potencies of PI3K- and Ras-dependent ERK activation.

Authors:  Murat Cirit; Jason M Haugh
Journal:  Biochem J       Date:  2012-01-01       Impact factor: 3.857

3.  Three-state kinetic mechanism for scaffold-mediated signal transduction.

Authors:  Jason W Locasale
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2008-11-21

4.  Tunable signal processing through a kinase control cycle: the IKK signaling node.

Authors:  Marcelo Behar; Alexander Hoffmann
Journal:  Biophys J       Date:  2013-07-02       Impact factor: 4.033

5.  The dynamics of signaling as a pharmacological target.

Authors:  Marcelo Behar; Derren Barken; Shannon L Werner; Alexander Hoffmann
Journal:  Cell       Date:  2013-10-10       Impact factor: 41.582

6.  From Physics to Pharmacology?

Authors:  Richard J Allen; Timothy C Elston
Journal:  Rep Prog Phys       Date:  2011-01

Review 7.  Encoding and decoding cellular information through signaling dynamics.

Authors:  Jeremy E Purvis; Galit Lahav
Journal:  Cell       Date:  2013-02-28       Impact factor: 41.582

8.  Ultrasensitive responses and specificity in cell signaling.

Authors:  Seth Haney; Lee Bardwell; Qing Nie
Journal:  BMC Syst Biol       Date:  2010-08-25

9.  Propagation of kinetic uncertainties through a canonical topology of the TLR4 signaling network in different regions of biochemical reaction space.

Authors:  Jayson Gutiérrez; Georges St Laurent; Silvio Urcuqui-Inchima
Journal:  Theor Biol Med Model       Date:  2010-03-15       Impact factor: 2.432

10.  Signal duration and the time scale dependence of signal integration in biochemical pathways.

Authors:  Jason W Locasale
Journal:  BMC Syst Biol       Date:  2008-12-17
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.