Literature DB >> 17848549

Laser excitation studies of the product release steps in the catalytic cycle of the light-driven enzyme, protochlorophyllide oxidoreductase.

Derren J Heyes1, Michiyo Sakuma, Nigel S Scrutton.   

Abstract

The latter stages of the catalytic cycle of the light-driven enzyme, protochlorophyllide oxidoreductase, have been investigated using novel laser photoexcitation methods. The formation of the ternary product complex was initiated with a 6-ns laser pulse, which allowed the product release steps to be kinetically accessed for the first time. Subsequent absorbance changes associated with the release of the NADP+ and chlorophyllide products from the enzyme could be followed on a millisecond timescale. This has facilitated a detailed kinetic and thermodynamic characterization for the interconversion of all the various bound and unbound product species. Initially, NADP+ is released from the enzyme in a biphasic process with rate constants of 1210 and 237 s(-1). The rates of both phases show a significant dependence on the viscosity of the solvent and become considerably slower at higher glycerol concentrations. The fast phase of this process exhibits no dependence on NADP+ concentration, suggesting that conformational changes are required prior to NADP+ release. Following NADP+ release, the NADPH rebinds to the enzyme with a maximum rate constant of approximately 72 s(-1). At elevated temperatures (>298 K) chlorophyllide is released from the enzyme to yield the free product with a maximum rate constant of 20 s(-1). The temperature dependencies of the rates of each of these steps were measured, and enthalpies and entropies of activation were calculated using the Eyring equation. A comprehensive kinetic and thermodynamic scheme for these final stages of the reaction mechanism is presented.

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Year:  2007        PMID: 17848549     DOI: 10.1074/jbc.M706098200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  9 in total

1.  NADPH:protochlorophyllide oxidoreductase B (PORB) action in Arabidopsis thaliana revisited through transgenic expression of engineered barley PORB mutant proteins.

Authors:  Frank Buhr; Abderrahim Lahroussi; Armin Springer; Sachin Rustgi; Diter von Wettstein; Christiane Reinbothe; Steffen Reinbothe
Journal:  Plant Mol Biol       Date:  2017-03-04       Impact factor: 4.076

2.  Simultaneous measurements of solvent dynamics and functional kinetics in a light-activated enzyme.

Authors:  Guillaume Durin; Aude Delaunay; Claudine Darnault; Derren J Heyes; Antoine Royant; Xavier Vernede; C Neil Hunter; Martin Weik; Dominique Bourgeois
Journal:  Biophys J       Date:  2009-03-04       Impact factor: 4.033

Review 3.  Photocatalysis as the 'master switch' of photomorphogenesis in early plant development.

Authors:  Derren J Heyes; Shaowei Zhang; Aoife Taylor; Linus O Johannissen; Samantha J O Hardman; Sam Hay; Nigel S Scrutton
Journal:  Nat Plants       Date:  2021-03-08       Impact factor: 15.793

4.  A twin-track approach has optimized proton and hydride transfer by dynamically coupled tunneling during the evolution of protochlorophyllide oxidoreductase.

Authors:  Derren J Heyes; Colin Levy; Michiyo Sakuma; David L Robertson; Nigel S Scrutton
Journal:  J Biol Chem       Date:  2011-02-11       Impact factor: 5.157

5.  Mutagenesis alters the catalytic mechanism of the light-driven enzyme protochlorophyllide oxidoreductase.

Authors:  Binuraj R K Menon; Paul A Davison; C Neil Hunter; Nigel S Scrutton; Derren J Heyes
Journal:  J Biol Chem       Date:  2009-10-22       Impact factor: 5.157

6.  Cryogenic and laser photoexcitation studies identify multiple roles for active site residues in the light-driven enzyme protochlorophyllide oxidoreductase.

Authors:  Binuraj R K Menon; Jonathan P Waltho; Nigel S Scrutton; Derren J Heyes
Journal:  J Biol Chem       Date:  2009-05-13       Impact factor: 5.157

7.  Mechanistic reappraisal of early stage photochemistry in the light-driven enzyme protochlorophyllide oxidoreductase.

Authors:  Derren J Heyes; Samantha J O Hardman; David Mansell; John M Gardiner; Nigel S Scrutton
Journal:  PLoS One       Date:  2012-09-26       Impact factor: 3.240

8.  Ultrafast red light activation of Synechocystis phytochrome Cph1 triggers major structural change to form the Pfr signalling-competent state.

Authors:  Derren J Heyes; Basile Khara; Michiyo Sakuma; Samantha J O Hardman; Ronan O'Cualain; Stephen E J Rigby; Nigel S Scrutton
Journal:  PLoS One       Date:  2012-12-26       Impact factor: 3.240

9.  Multiple active site residues are important for photochemical efficiency in the light-activated enzyme protochlorophyllide oxidoreductase (POR).

Authors:  Binuraj R K Menon; Samantha J O Hardman; Nigel S Scrutton; Derren J Heyes
Journal:  J Photochem Photobiol B       Date:  2016-06-01       Impact factor: 6.252

  9 in total

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