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Literature DB >> 17762912

DNA ejection from bacteriophage: towards a general behavior for osmotic-suppression experiments.

Abstract

We present in this work in vitro measurements of the force ejecting DNA from two distinct bacteriophages (T5 and lambda using the osmotic-suppression technique. Our data are analyzed by revisiting the current theories of DNA packaging in spherical capsids. In particular we show that a simplified analytical model based on bending considerations only is able to account quantitatively for the experimental findings. Physical and biological consequences are discussed.

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Year: 2007 PMID： 17762912 DOI： 10.1140/epje/i2007-10205-5

Source DB: PubMed Journal: Eur Phys J E Soft Matter ISSN： 1292-8941 Impact factor: 1.890

39 in total

1. DNA ejection from bacteriophage T5: analysis of the kinetics and energetics.

Authors: Marta de Frutos; Lucienne Letellier; Eric Raspaud
Journal: Biophys J Date: 2004-11-12 Impact factor: 4.033

2. Mechanism of force generation of a viral DNA packaging motor.

Authors: Yann R Chemla; K Aathavan; Jens Michaelis; Shelley Grimes; Paul J Jardine; Dwight L Anderson; Carlos Bustamante
Journal: Cell Date: 2005-09-09 Impact factor: 41.582

Review 3. Fifty-three years since Hershey and Chase; much ado about pressure but which pressure is it?

Authors: Ian J Molineux
Journal: Virology Date: 2006-01-05 Impact factor: 3.616

4. Langevin dynamics simulations of genome packing in bacteriophage.

Authors: Christopher Forrey; M Muthukumar
Journal: Biophys J Date: 2006-04-14 Impact factor: 4.033

5. Encapsidated conformation of bacteriophage T7 DNA.

Authors: M E Cerritelli; N Cheng; A H Rosenberg; C E McPherson; F P Booy; A C Steven
Journal: Cell Date: 1997-10-17 Impact factor: 41.582

6. Purification and structural and functional characterization of FhuA, a transporter of the Escherichia coli outer membrane.

Authors: P Boulanger; M le Maire; M Bonhivers; S Dubois; M Desmadril; L Letellier
Journal: Biochemistry Date: 1996-11-12 Impact factor: 3.162

7. DNA arrangement in isometric phage heads.

Authors: W C Earnshaw; S C Harrison
Journal: Nature Date: 1977-08-18 Impact factor: 49.962

8. Forces controlling the rate of DNA ejection from phage lambda.

Authors: David Löf; Karin Schillén; Bengt Jönsson; Alex Evilevitch
Journal: J Mol Biol Date: 2007-02-06 Impact factor: 5.469

9. Effect of spermine and DNase on DNA release from bacteriophage T5.

Authors: M de Frutos; S Brasiles; P Tavares; E Raspaud
Journal: Eur Phys J E Soft Matter Date: 2005-08-03 Impact factor: 1.890

10. Condensation of DNA by multivalent cations: considerations on mechanism.

Authors: V A Bloomfield
Journal: Biopolymers Date: 1991-11 Impact factor: 2.505

9 in total

1. Is the in vitro ejection of bacteriophage DNA quasistatic? A bulk to single virus study.

Authors: N Chiaruttini; M de Frutos; E Augarde; P Boulanger; L Letellier; V Viasnoff
Journal: Biophys J Date: 2010-07-21 Impact factor: 4.033

2. DNA-DNA interactions in bacteriophage capsids are responsible for the observed DNA knotting.

Authors: Davide Marenduzzo; Enzo Orlandini; Andrzej Stasiak; De Witt Sumners; Luca Tubiana; Cristian Micheletti
Journal: Proc Natl Acad Sci U S A Date: 2009-12-14 Impact factor: 11.205

3. Translocation of a granular chain in a horizontally vibrated saw-tooth channel.

Authors: Fariba Mortazavi; Mehdi Habibi; Ehsan Nedaaee Oskoee
Journal: Eur Phys J E Soft Matter Date: 2016-10-21 Impact factor: 1.890

4. Chemical mapping of DNA and counter-ion content inside phage by energy-filtered TEM.

Authors: Pernilla Nevsten; Alex Evilevitch; Reine Wallenberg
Journal: J Biol Phys Date: 2011-08-26 Impact factor: 1.365

5. DNA ejection from an archaeal virus--a single-molecule approach.

Authors: K J Hanhijärvi; G Ziedaite; M K Pietilä; E Hæggström; D H Bamford
Journal: Biophys J Date: 2013-05-21 Impact factor: 4.033

6. Effects of pulling forces, osmotic pressure, condensing agents and viscosity on the thermodynamics and kinetics of DNA ejection from bacteriophages to bacterial cells: a computational study.

Authors: Anton S Petrov; Scott S Douglas; Stephen C Harvey
Journal: J Phys Condens Matter Date: 2013-02-12 Impact factor: 2.333