Literature DB >> 17717085

Evolution of a fluorinated green fluorescent protein.

Tae Hyeon Yoo1, A James Link, David A Tirrell.   

Abstract

The fluorescence of bacterial cells expressing a variant (GFPm) of the green fluorescent protein (GFP) was reduced to background levels by global replacement of the leucine residues of GFPm by 5,5,5-trifluoroleucine. Eleven rounds of random mutagenesis and screening via fluorescence-activated cell sorting yielded a GFP mutant containing 20 amino acid substitutions. The mutant protein in fluorinated form showed improved folding efficiency both in vivo and in vitro, and the median fluorescence of cells expressing the fluorinated protein was improved approximately 650-fold in comparison to that of cells expressing fluorinated GFPm. The success of this approach demonstrates the feasibility of engineering functional proteins containing many copies of abiological amino acid constituents.

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Year:  2007        PMID: 17717085      PMCID: PMC1955812          DOI: 10.1073/pnas.0701904104

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  28 in total

1.  Fluorinated Coiled-Coil Proteins Prepared In Vivo Display Enhanced Thermal and Chemical Stability This work was supported by a grant from the U.S. Army Research Office. Y. Tang is supported by a Whitaker Graduate Research Fellowship. We thank Dr. Gary Hathaway for performing matrix-assisted laser desorption/ionization analyses.

Authors:  Yi Tang; Giovanna Ghirlanda; Wendy A. Petka; Tadashi Nakajima; William F. DeGrado; David A. Tirrell
Journal:  Angew Chem Int Ed Engl       Date:  2001-04-17       Impact factor: 15.336

Review 2.  Progress in modeling of protein structures and interactions.

Authors:  Ora Schueler-Furman; Chu Wang; Phil Bradley; Kira Misura; David Baker
Journal:  Science       Date:  2005-10-28       Impact factor: 47.728

Review 3.  Directed evolution of proteins for heterologous expression and stability.

Authors:  Cintia Roodveldt; Amir Aharoni; Dan S Tawfik
Journal:  Curr Opin Struct Biol       Date:  2005-02       Impact factor: 6.809

4.  Acid denaturation and refolding of green fluorescent protein.

Authors:  Sawako Enoki; Kimiko Saeki; Kosuke Maki; Kunihiro Kuwajima
Journal:  Biochemistry       Date:  2004-11-09       Impact factor: 3.162

5.  Evolving proteins of novel composition.

Authors:  Jin Kim Montclare; David A Tirrell
Journal:  Angew Chem Int Ed Engl       Date:  2006-07-03       Impact factor: 15.336

6.  Stabilization of bzip peptides through incorporation of fluorinated aliphatic residues.

Authors:  Soojin Son; I Caglar Tanrikulu; David A Tirrell
Journal:  Chembiochem       Date:  2006-08       Impact factor: 3.164

Review 7.  The green fluorescent protein.

Authors:  R Y Tsien
Journal:  Annu Rev Biochem       Date:  1998       Impact factor: 23.643

8.  Improved green fluorescent protein by molecular evolution using DNA shuffling.

Authors:  A Crameri; E A Whitehorn; E Tate; W P Stemmer
Journal:  Nat Biotechnol       Date:  1996-03       Impact factor: 54.908

9.  The molecular structure of green fluorescent protein.

Authors:  F Yang; L G Moss; G N Phillips
Journal:  Nat Biotechnol       Date:  1996-10       Impact factor: 54.908

10.  Modulating protein folding rates in vivo and in vitro by side-chain interactions between the parallel beta strands of green fluorescent protein.

Authors:  J S Merkel; L Regan
Journal:  J Biol Chem       Date:  2000-09-22       Impact factor: 5.157

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  31 in total

1.  Therapeutic enzyme deimmunization by combinatorial T-cell epitope removal using neutral drift.

Authors:  Jason R Cantor; Tae Hyeon Yoo; Aakanksha Dixit; Brent L Iverson; Thomas G Forsthuber; George Georgiou
Journal:  Proc Natl Acad Sci U S A       Date:  2011-01-05       Impact factor: 11.205

Review 2.  Residue-specific incorporation of non-canonical amino acids into proteins: recent developments and applications.

Authors:  Jeremiah A Johnson; Ying Y Lu; James A Van Deventer; David A Tirrell
Journal:  Curr Opin Chem Biol       Date:  2010-11-09       Impact factor: 8.822

Review 3.  Optimizing non-natural protein function with directed evolution.

Authors:  Eric M Brustad; Frances H Arnold
Journal:  Curr Opin Chem Biol       Date:  2010-12-23       Impact factor: 8.822

Review 4.  Protein-Engineered Functional Materials.

Authors:  Yao Wang; Priya Katyal; Jin Kim Montclare
Journal:  Adv Healthc Mater       Date:  2019-04-02       Impact factor: 9.933

Review 5.  Cell tracing techniques in stem cell transplantation.

Authors:  Li Yan; Ying Han; Yuanlong He; Huahong Xie; Jingmei Liu; Lina Zhao; Jingbo Wang; Liuchun Gao; Daiming Fan
Journal:  Stem Cell Rev       Date:  2007-12       Impact factor: 5.739

6.  Expanding metabolism for biosynthesis of nonnatural alcohols.

Authors:  Kechun Zhang; Michael R Sawaya; David S Eisenberg; James C Liao
Journal:  Proc Natl Acad Sci U S A       Date:  2008-12-08       Impact factor: 11.205

7.  Protein evolution with an expanded genetic code.

Authors:  Chang C Liu; Antha V Mack; Meng-Lin Tsao; Jeremy H Mills; Hyun Soo Lee; Hyeryun Choe; Michael Farzan; Peter G Schultz; Vaughn V Smider
Journal:  Proc Natl Acad Sci U S A       Date:  2008-11-11       Impact factor: 11.205

8.  Single-Color Fluorescence Lifetime Cross-Correlation Spectroscopy In Vivo.

Authors:  Martin Štefl; Konrad Herbst; Marc Rübsam; Aleš Benda; Michael Knop
Journal:  Biophys J       Date:  2020-08-20       Impact factor: 4.033

9.  Protein evolution via amino acid and codon elimination.

Authors:  Lise Goltermann; Marie Sofie Yoo Larsen; Rajat Banerjee; Andreas C Joerger; Michael Ibba; Thomas Bentin
Journal:  PLoS One       Date:  2010-04-26       Impact factor: 3.240

Review 10.  Exploring protein fitness landscapes by directed evolution.

Authors:  Philip A Romero; Frances H Arnold
Journal:  Nat Rev Mol Cell Biol       Date:  2009-12       Impact factor: 94.444

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