Literature DB >> 17702912

Synchrony dynamics during initiation, failure, and rescue of the segmentation clock.

Ingmar H Riedel-Kruse1, Claudia Müller, Andrew C Oates.   

Abstract

The "segmentation clock" is thought to coordinate sequential segmentation of the body axis in vertebrate embryos. This clock comprises a multicellular genetic network of synchronized oscillators, coupled by intercellular Delta-Notch signaling. How this synchrony is established and how its loss determines the position of segmentation defects in Delta and Notch mutants are unknown. We analyzed the clock's synchrony dynamics by varying strength and timing of Notch coupling in zebra-fish embryos with techniques for quantitative perturbation of gene function. We developed a physical theory based on coupled phase oscillators explaining the observed onset and rescue of segmentation defects, the clock's robustness against developmental noise, and a critical point beyond which synchrony decays. We conclude that synchrony among these genetic oscillators can be established by simultaneous initiation and self-organization and that the segmentation defect position is determined by the difference between coupling strength and noise.

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Year:  2007        PMID: 17702912     DOI: 10.1126/science.1142538

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  85 in total

1.  Delayed coupling theory of vertebrate segmentation.

Authors:  Luis G Morelli; Saúl Ares; Leah Herrgen; Christian Schröter; Frank Jülicher; Andrew C Oates
Journal:  HFSP J       Date:  2008-12-10

Review 2.  What keeps us ticking: a funny current, a calcium clock, or both?

Authors:  Edward G Lakatta; Dario DiFrancesco
Journal:  J Mol Cell Cardiol       Date:  2009-04-08       Impact factor: 5.000

3.  "Developmental mechanics": cellular patterns controlled by adhesion, cortical tension and cell division.

Authors:  Thomas Lecuit
Journal:  HFSP J       Date:  2008-03-25

4.  Identification of direct T-box target genes in the developing zebrafish mesoderm.

Authors:  Aaron T Garnett; Tina M Han; Michael J Gilchrist; James C Smith; Michael B Eisen; Fiona C Wardle; Sharon L Amacher
Journal:  Development       Date:  2009-01-21       Impact factor: 6.868

5.  How can mathematics help us explore vertebrate segmentation?

Authors:  Ruth E Baker; Santiago Schnell
Journal:  HFSP J       Date:  2009-01-27

Review 6.  Quantitative approaches in developmental biology.

Authors:  Andrew C Oates; Nicole Gorfinkiel; Marcos González-Gaitán; Carl-Philipp Heisenberg
Journal:  Nat Rev Genet       Date:  2009-08       Impact factor: 53.242

7.  Synchronized oscillation of the segmentation clock gene in vertebrate development.

Authors:  Koichiro Uriu; Yoshihiro Morishita; Yoh Iwasa
Journal:  J Math Biol       Date:  2009-09-16       Impact factor: 2.259

8.  Cell state switching factors and dynamical patterning modules: complementary mediators of plasticity in development and evolution.

Authors:  Stuart A Newman; Ramray Bhat; Nadejda V Mezentseva
Journal:  J Biosci       Date:  2009-10       Impact factor: 1.826

9.  Different types of oscillations in Notch and Fgf signaling regulate the spatiotemporal periodicity of somitogenesis.

Authors:  Yasutaka Niwa; Hiromi Shimojo; Akihiro Isomura; Aitor González; Hitoshi Miyachi; Ryoichiro Kageyama
Journal:  Genes Dev       Date:  2011-06-01       Impact factor: 11.361

Review 10.  Modeling the Notch Response.

Authors:  Udi Binshtok; David Sprinzak
Journal:  Adv Exp Med Biol       Date:  2018       Impact factor: 2.622

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