Literature DB >> 19649154

How can mathematics help us explore vertebrate segmentation?

Ruth E Baker, Santiago Schnell.   

Abstract

Since the discovery of gene products oscillating during the formation of vertebral segments, much attention has been directed toward eluciating the molecular basis of the so-called segmentation clock. What research has told us is, that even in the most simple vertebrates, enormously complicated gene networks act in each cell to give rise to oscillations, and that cell-cell communication synchronizes these oscillations between neighboring cells. A number of theories have been proposed to explain both the initiation and maintenance of oscillations in a single cell and the synchronization of such oscillations between cells. We discuss these theories in this Commentary.

Year:  2009        PMID: 19649154      PMCID: PMC2689611          DOI: 10.2976/1.3072371

Source DB:  PubMed          Journal:  HFSP J        ISSN: 1955-205X


  18 in total

Review 1.  The vertebrate segmentation clock.

Authors:  O Pourquie
Journal:  J Anat       Date:  2001 Jul-Aug       Impact factor: 2.610

2.  Oscillatory expression of Hes1, p53, and NF-kappaB driven by transcriptional time delays.

Authors:  Nicholas A M Monk
Journal:  Curr Biol       Date:  2003-08-19       Impact factor: 10.834

3.  Autoinhibition with transcriptional delay: a simple mechanism for the zebrafish somitogenesis oscillator.

Authors:  Julian Lewis
Journal:  Curr Biol       Date:  2003-08-19       Impact factor: 10.834

4.  A complex oscillating network of signaling genes underlies the mouse segmentation clock.

Authors:  Mary-Lee Dequéant; Earl Glynn; Karin Gaudenz; Matthias Wahl; Jie Chen; Arcady Mushegian; Olivier Pourquié
Journal:  Science       Date:  2006-11-09       Impact factor: 47.728

Review 5.  Mathematical models for somite formation.

Authors:  Ruth E Baker; Santiago Schnell; Philip K Maini
Journal:  Curr Top Dev Biol       Date:  2008       Impact factor: 4.897

6.  A molecular clock operates during chick autopod proximal-distal outgrowth.

Authors:  Susana Pascoal; Cláudia R Carvalho; Joaquín Rodriguez-León; Marie-Claire Delfini; Delphine Duprez; Sólveig Thorsteinsdóttir; Isabel Palmeirim
Journal:  J Mol Biol       Date:  2007-02-09       Impact factor: 5.469

Review 7.  Segmental patterning of the vertebrate embryonic axis.

Authors:  Mary-Lee Dequéant; Olivier Pourquié
Journal:  Nat Rev Genet       Date:  2008-05       Impact factor: 53.242

8.  A clock and wavefront model for control of the number of repeated structures during animal morphogenesis.

Authors:  J Cooke; E C Zeeman
Journal:  J Theor Biol       Date:  1976-05-21       Impact factor: 2.691

9.  Modeling the segmentation clock as a network of coupled oscillations in the Notch, Wnt and FGF signaling pathways.

Authors:  Albert Goldbeter; Olivier Pourquié
Journal:  J Theor Biol       Date:  2008-01-18       Impact factor: 2.691

10.  A proposed mechanism for the interaction of the segmentation clock and the determination front in somitogenesis.

Authors:  Moisés Santillán; Michael C Mackey
Journal:  PLoS One       Date:  2008-02-06       Impact factor: 3.240

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  4 in total

1.  The kinetics in mathematical models on segmentation clock genes in zebrafish.

Authors:  Kuan-Wei Chen; Kang-Ling Liao; Chih-Wen Shih
Journal:  J Math Biol       Date:  2017-05-25       Impact factor: 2.259

2.  Somitogenesis clock-wave initiation requires differential decay and multiple binding sites for clock protein.

Authors:  Mark Campanelli; Tomás Gedeon
Journal:  PLoS Comput Biol       Date:  2010-04-01       Impact factor: 4.475

3.  Self-Organization of Embryonic Genetic Oscillators into Spatiotemporal Wave Patterns.

Authors:  Charisios D Tsiairis; Alexander Aulehla
Journal:  Cell       Date:  2016-02-11       Impact factor: 41.582

4.  Collective Oscillations in Coupled-Cell Systems.

Authors:  Kuan-Wei Chen; Chih-Wen Shih
Journal:  Bull Math Biol       Date:  2021-04-23       Impact factor: 1.758

  4 in total

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