Literature DB >> 17666122

Single-molecule fluorescence to study molecular motors.

Hyokeun Park1, Erdal Toprak, Paul R Selvin.   

Abstract

Molecular motors, which use energy from ATP hydrolysis to take nanometer-scale steps with run-lengths on the order of micrometers, have important roles in areas such as transport and mitosis in living organisms. New techniques have recently been developed to measure these small movements at the single-molecule level. In particular, fluorescence imaging has contributed to the accurate measurement of this tiny movement. We introduce three single-molecule fluorescence imaging techniques which can find the position of a fluorophore with accuracy in the range of a few nanometers. These techniques are named after Hollywood animation characters: Fluorescence Imaging with One Nanometer Accuracy (FIONA), Single-molecule High-REsolution Colocalization (SHREC), and Defocused Orientation and Position Imaging (DOPI). We explain new understanding of molecular motors obtained from measurements using these techniques.

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Year:  2007        PMID: 17666122     DOI: 10.1017/S0033583507004611

Source DB:  PubMed          Journal:  Q Rev Biophys        ISSN: 0033-5835            Impact factor:   5.318


  19 in total

1.  Rapid, accurate particle tracking by calculation of radial symmetry centers.

Authors:  Raghuveer Parthasarathy
Journal:  Nat Methods       Date:  2012-06-10       Impact factor: 28.547

2.  Single-molecule fluorescence spectroscopy using phospholipid bilayer nanodiscs.

Authors:  Abhinav Nath; Adam J Trexler; Peter Koo; Andrew D Miranker; William M Atkins; Elizabeth Rhoades
Journal:  Methods Enzymol       Date:  2010       Impact factor: 1.600

3.  Probing molecular choreography through single-molecule biochemistry.

Authors:  Antoine M van Oijen; Nicholas E Dixon
Journal:  Nat Struct Mol Biol       Date:  2015-12       Impact factor: 15.369

Review 4.  RecBCD enzyme and the repair of double-stranded DNA breaks.

Authors:  Mark S Dillingham; Stephen C Kowalczykowski
Journal:  Microbiol Mol Biol Rev       Date:  2008-12       Impact factor: 11.056

5.  Four-dimensional spatial nanometry of single particles in living cells using polarized quantum rods.

Authors:  Tomonobu M Watanabe; Fumihiko Fujii; Takashi Jin; Eiji Umemoto; Masayuki Miyasaka; Hideaki Fujita; Toshio Yanagida
Journal:  Biophys J       Date:  2013-08-06       Impact factor: 4.033

Review 6.  Do-it-yourself guide: how to use the modern single-molecule toolkit.

Authors:  Nils G Walter; Cheng-Yen Huang; Anthony J Manzo; Mohamed A Sobhy
Journal:  Nat Methods       Date:  2008-06       Impact factor: 28.547

Review 7.  Single-molecule imaging brings Rad51 nucleoprotein filaments into focus.

Authors:  Anthony L Forget; Stephen C Kowalczykowski
Journal:  Trends Cell Biol       Date:  2010-03-17       Impact factor: 20.808

8.  Unique dynamics and exocytosis properties of GABAergic synaptic vesicles revealed by three-dimensional single vesicle tracking.

Authors:  Chungwon Park; Xingxiang Chen; Chong-Li Tian; Gyu Nam Park; Nicolas Chenouard; Hunki Lee; Xin Yi Yeo; Sangyong Jung; Richard W Tsien; Guo-Qiang Bi; Hyokeun Park
Journal:  Proc Natl Acad Sci U S A       Date:  2021-03-02       Impact factor: 11.205

9.  Single-molecule dynamics of gating in a neurotransmitter transporter homologue.

Authors:  Yongfang Zhao; Daniel Terry; Lei Shi; Harel Weinstein; Scott C Blanchard; Jonathan A Javitch
Journal:  Nature       Date:  2010-05-13       Impact factor: 49.962

Review 10.  Visualizing protein-DNA interactions at the single-molecule level.

Authors:  Jovencio Hilario; Stephen C Kowalczykowski
Journal:  Curr Opin Chem Biol       Date:  2009-11-27       Impact factor: 8.822

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