Literature DB >> 23931303

Four-dimensional spatial nanometry of single particles in living cells using polarized quantum rods.

Tomonobu M Watanabe1, Fumihiko Fujii, Takashi Jin, Eiji Umemoto, Masayuki Miyasaka, Hideaki Fujita, Toshio Yanagida.   

Abstract

Single particle tracking is widely used to study protein movement with high spatiotemporal resolution both in vitro and in cells. Quantum dots, which are semiconductor nanoparticles, have recently been employed in single particle tracking because of their intense and stable fluorescence. Although single particles inside cells have been tracked in three spatial dimensions (X, Y, Z), measurement of the angular orientation of a molecule being tracked would significantly enhance our understanding of the molecule's function. In this study, we synthesized highly polarized, rod-shaped quantum dots (Qrods) and developed a coating method that optimizes the Qrods for biological imaging. We describe a Qrod-based single particle tracking technique that blends optical nanometry with nanomaterial science to simultaneously measure the three-dimensional and angular movements of molecules. Using Qrods, we spatially tracked a membrane receptor in living cells in four dimensions with precision close to the single-digit range in nanometers and degrees.
Copyright © 2013 Biophysical Society. Published by Elsevier Inc. All rights reserved.

Mesh:

Year:  2013        PMID: 23931303      PMCID: PMC3736678          DOI: 10.1016/j.bpj.2013.07.001

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  44 in total

1.  Fluorescence microscopy for simultaneous observation of 3D orientation and movement and its application to quantum rod-tagged myosin V.

Authors:  Masashi Ohmachi; Yasunori Komori; Atsuko H Iwane; Fumihiko Fujii; Takashi Jin; Toshio Yanagida
Journal:  Proc Natl Acad Sci U S A       Date:  2012-03-19       Impact factor: 11.205

2.  Differential labeling of myosin V heads with quantum dots allows direct visualization of hand-over-hand processivity.

Authors:  David M Warshaw; Guy G Kennedy; Steven S Work; Elena B Krementsova; Samantha Beck; Kathleen M Trybus
Journal:  Biophys J       Date:  2005-03-11       Impact factor: 4.033

Review 3.  Three-dimensional particle tracking via bifocal imaging.

Authors:  Erdal Toprak; Hamza Balci; Benjamin H Blehm; Paul R Selvin
Journal:  Nano Lett       Date:  2007-06-21       Impact factor: 11.189

Review 4.  Single-molecule fluorescence to study molecular motors.

Authors:  Hyokeun Park; Erdal Toprak; Paul R Selvin
Journal:  Q Rev Biophys       Date:  2007-07-31       Impact factor: 5.318

5.  Quantum dot bioconjugates for ultrasensitive nonisotopic detection.

Authors:  W C Chan; S Nie
Journal:  Science       Date:  1998-09-25       Impact factor: 47.728

6.  Multiplane imaging and three dimensional nanoscale particle tracking in biological microscopy.

Authors:  Paul A Dalgarno; Heather I C Dalgarno; Aurélie Putoud; Robert Lambert; Lynn Paterson; David C Logan; David P Towers; Richard J Warburton; Alan H Greenaway
Journal:  Opt Express       Date:  2010-01-18       Impact factor: 3.894

7.  Forming biocompatible and nonaggregated nanocrystals in water using amphiphilic polymers.

Authors:  William W Yu; Emmanuel Chang; Joshua C Falkner; Junyan Zhang; Ali M Al-Somali; Christie M Sayes; Judah Johns; Rebekah Drezek; Vicki L Colvin
Journal:  J Am Chem Soc       Date:  2007-02-20       Impact factor: 15.419

8.  Linearly polarized emission from colloidal semiconductor quantum rods.

Authors:  J Hu; W Yang; L Manna; A P Alivisatos
Journal:  Science       Date:  2001-05-03       Impact factor: 47.728

9.  CdSe/CdS/ZnS double shell nanorods with high photoluminescence efficiency and their exploitation as biolabeling probes.

Authors:  Sasanka Deka; Alessandra Quarta; Maria Grazia Lupo; Andrea Falqui; Simona Boninelli; Cinzia Giannini; Giovanni Morello; Milena De Giorgi; Guglielmo Lanzani; Corrado Spinella; Roberto Cingolani; Teresa Pellegrino; Liberato Manna
Journal:  J Am Chem Soc       Date:  2009-03-04       Impact factor: 15.419

10.  Synthesis and Characterization of Anti-HER2 Antibody Conjugated CdSe/CdZnS Quantum Dots for Fluorescence Imaging of Breast Cancer Cells.

Authors:  Dhermendra K Tiwari; Shin-Ichi Tanaka; Yasushi Inouye; Keiko Yoshizawa; Tomonobu M Watanabe; Takashi Jin
Journal:  Sensors (Basel)       Date:  2009-11-19       Impact factor: 3.576

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  8 in total

1.  Analysis of the Fluorescence Correlation Function of Quantum Rods with Different Lengths.

Authors:  Jaeran Lee; Sok Won Kim
Journal:  J Fluoresc       Date:  2015-09-23       Impact factor: 2.217

2.  The More Exotic Shapes of Semiconductor Nanocrystals: Emerging Applications in Bioimaging.

Authors:  Sung Jun Lim; Andrew Smith; Shuming Nie
Journal:  Curr Opin Chem Eng       Date:  2014-05-01       Impact factor: 5.163

3.  Simultaneous nano-tracking of multiple motor proteins via spectral discrimination of quantum dots.

Authors:  Taishi Kakizuka; Keigo Ikezaki; Junichi Kaneshiro; Hideaki Fujita; Tomonobu M Watanabe; Taro Ichimura
Journal:  Biomed Opt Express       Date:  2016-06-02       Impact factor: 3.732

4.  Tracking single-particle rotation during macrophage uptake.

Authors:  Lucero Sanchez; Paul Patton; Stephen M Anthony; Yi Yi; Yan Yu
Journal:  Soft Matter       Date:  2015-06-10       Impact factor: 3.679

5.  Sarcomere length nanometry in rat neonatal cardiomyocytes expressed with α-actinin-AcGFP in Z discs.

Authors:  Seine A Shintani; Kotaro Oyama; Fuyu Kobirumaki-Shimozawa; Takashi Ohki; Shin'ichi Ishiwata; Norio Fukuda
Journal:  J Gen Physiol       Date:  2014-03-17       Impact factor: 4.086

Review 6.  Nano-scale measurement of biomolecules by optical microscopy and semiconductor nanoparticles.

Authors:  Taro Ichimura; Takashi Jin; Hideaki Fujita; Hideo Higuchi; Tomonobu M Watanabe
Journal:  Front Physiol       Date:  2014-07-29       Impact factor: 4.566

7.  Live-cell single-molecule labeling and analysis of myosin motors with quantum dots.

Authors:  Hiroyasu Hatakeyama; Yoshihito Nakahata; Hirokazu Yarimizu; Makoto Kanzaki
Journal:  Mol Biol Cell       Date:  2016-11-09       Impact factor: 4.138

8.  Axial electrokinetic trapping of anisotropic particles.

Authors:  Filip Strubbe; Bavo Robben; John Puthenparampil George; Íngrid Amer Cid; Filip Beunis; Kristiaan Neyts
Journal:  Sci Rep       Date:  2019-02-26       Impact factor: 4.379

  8 in total

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