Literature DB >> 19617364

Processive endoglucanases mediate degradation of cellulose by Saccharophagus degradans.

Brian J Watson1, Haitao Zhang, Atkinson G Longmire, Young Hwan Moon, Steven W Hutcheson.   

Abstract

Bacteria and fungi are thought to degrade cellulose through the activity of either a complexed or a noncomplexed cellulolytic system composed of endoglucanases and cellobiohydrolases. The marine bacterium Saccharophagus degradans 2-40 produces a multicomponent cellulolytic system that is unusual in its abundance of GH5-containing endoglucanases. Secreted enzymes of this bacterium release high levels of cellobiose from cellulosic materials. Through cloning and purification, the predicted biochemical activities of the one annotated cellobiohydrolase Cel6A and the GH5-containing endoglucanases were evaluated. Cel6A was shown to be a classic endoglucanase, but Cel5H showed significantly higher activity on several types of cellulose, was the highest expressed, and processively released cellobiose from cellulosic substrates. Cel5G, Cel5H, and Cel5J were found to be members of a separate phylogenetic clade and were all shown to be processive. The processive endoglucanases are functionally equivalent to the endoglucanases and cellobiohydrolases required for other cellulolytic systems, thus providing a cellobiohydrolase-independent mechanism for this bacterium to convert cellulose to glucose.

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Year:  2009        PMID: 19617364      PMCID: PMC2737977          DOI: 10.1128/JB.00481-09

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  36 in total

Review 1.  A structural basis for processivity.

Authors:  W A Breyer; B W Matthews
Journal:  Protein Sci       Date:  2001-09       Impact factor: 6.725

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Authors:  Y-H Percival Zhang; Jingbiao Cui; Lee R Lynd; Lana R Kuang
Journal:  Biomacromolecules       Date:  2006-02       Impact factor: 6.988

3.  Biomass recalcitrance: engineering plants and enzymes for biofuels production.

Authors:  Michael E Himmel; Shi-You Ding; David K Johnson; William S Adney; Mark R Nimlos; John W Brady; Thomas D Foust
Journal:  Science       Date:  2007-02-09       Impact factor: 47.728

Review 4.  Cellulose, cellulases and cellulosomes.

Authors:  E A Bayer; H Chanzy; R Lamed; Y Shoham
Journal:  Curr Opin Struct Biol       Date:  1998-10       Impact factor: 6.809

5.  Genome sequence of the cellulolytic gliding bacterium Cytophaga hutchinsonii.

Authors:  Gary Xie; David C Bruce; Jean F Challacombe; Olga Chertkov; John C Detter; Paul Gilna; Cliff S Han; Susan Lucas; Monica Misra; Gerald L Myers; Paul Richardson; Roxanne Tapia; Nina Thayer; Linda S Thompson; Thomas S Brettin; Bernard Henrissat; David B Wilson; Mark J McBride
Journal:  Appl Environ Microbiol       Date:  2007-03-30       Impact factor: 4.792

6.  Studies of Thermobifida fusca plant cell wall degrading enzymes.

Authors:  David B Wilson
Journal:  Chem Rec       Date:  2004       Impact factor: 6.771

7.  Identification and analysis of polyserine linker domains in prokaryotic proteins with emphasis on the marine bacterium Microbulbifer degradans.

Authors:  Michael B Howard; Nathan A Ekborg; Larry E Taylor; Steven W Hutcheson; Ronald M Weiner
Journal:  Protein Sci       Date:  2004-04-09       Impact factor: 6.725

8.  Processivity, substrate binding, and mechanism of cellulose hydrolysis by Thermobifida fusca Cel9A.

Authors:  Yongchao Li; Diana C Irwin; David B Wilson
Journal:  Appl Environ Microbiol       Date:  2007-03-16       Impact factor: 4.792

9.  Crystal structure of the catalytic domain of a bacterial cellulase belonging to family 5.

Authors:  V Ducros; M Czjzek; A Belaich; C Gaudin; H P Fierobe; J P Belaich; G J Davies; R Haser
Journal:  Structure       Date:  1995-09-15       Impact factor: 5.006

10.  Complete genome sequence of the complex carbohydrate-degrading marine bacterium, Saccharophagus degradans strain 2-40 T.

Authors:  Ronald M Weiner; Larry E Taylor; Bernard Henrissat; Loren Hauser; Miriam Land; Pedro M Coutinho; Corinne Rancurel; Elizabeth H Saunders; Atkinson G Longmire; Haitao Zhang; Edward A Bayer; Harry J Gilbert; Frank Larimer; Igor B Zhulin; Nathan A Ekborg; Raphael Lamed; Paul M Richardson; Ilya Borovok; Steven Hutcheson
Journal:  PLoS Genet       Date:  2008-05-30       Impact factor: 5.917

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  34 in total

1.  Caldicellulosiruptor core and pangenomes reveal determinants for noncellulosomal thermophilic deconstruction of plant biomass.

Authors:  Sara E Blumer-Schuette; Richard J Giannone; Jeffrey V Zurawski; Inci Ozdemir; Qin Ma; Yanbin Yin; Ying Xu; Irina Kataeva; Farris L Poole; Michael W W Adams; Scott D Hamilton-Brehm; James G Elkins; Frank W Larimer; Miriam L Land; Loren J Hauser; Robert W Cottingham; Robert L Hettich; Robert M Kelly
Journal:  J Bacteriol       Date:  2012-05-25       Impact factor: 3.490

2.  Processivity of cellobiohydrolases is limited by the substrate.

Authors:  Mihhail Kurasin; Priit Väljamäe
Journal:  J Biol Chem       Date:  2010-11-04       Impact factor: 5.157

3.  Extracellular endoglucanase activity from Paenibacillus polymyxa BEb-40: production, optimization and enzymatic characterization.

Authors:  Argel Gastelum-Arellanez; Octavio Paredes-López; Víctor Olalde-Portugal
Journal:  World J Microbiol Biotechnol       Date:  2014-08-24       Impact factor: 3.312

4.  Crystal Structure and Substrate Recognition of Cellobionic Acid Phosphorylase, Which Plays a Key Role in Oxidative Cellulose Degradation by Microbes.

Authors:  Young-Woo Nam; Takanori Nihira; Takatoshi Arakawa; Yuka Saito; Motomitsu Kitaoka; Hiroyuki Nakai; Shinya Fushinobu
Journal:  J Biol Chem       Date:  2015-06-03       Impact factor: 5.157

5.  Complex expression of the cellulolytic transcriptome of Saccharophagus degradans.

Authors:  Haitao Zhang; Steven W Hutcheson
Journal:  Appl Environ Microbiol       Date:  2011-06-24       Impact factor: 4.792

6.  Hydrolytic and phosphorolytic metabolism of cellobiose by the marine aerobic bacterium Saccharophagus degradans 2-40T.

Authors:  Haitao Zhang; Young Hwan Moon; Brian J Watson; Maxim Suvorov; Elizabeth Santos; Corinn A Sinnott; Steven W Hutcheson
Journal:  J Ind Microbiol Biotechnol       Date:  2011-02-13       Impact factor: 3.346

7.  Processivity and enzymatic mode of a glycoside hydrolase family 5 endoglucanase from Volvariella volvacea.

Authors:  Fei Zheng; Shaojun Ding
Journal:  Appl Environ Microbiol       Date:  2012-11-30       Impact factor: 4.792

8.  The Quaternary Structure of a Glycoside Hydrolase Dictates Specificity toward β-Glucans.

Authors:  Mickael Lafond; Gerlind Sulzenbacher; Thibaud Freyd; Bernard Henrissat; Jean-Guy Berrin; Marie-Line Garron
Journal:  J Biol Chem       Date:  2016-01-11       Impact factor: 5.157

9.  Cellulase processivity.

Authors:  David B Wilson; Maxim Kostylev
Journal:  Methods Mol Biol       Date:  2012

10.  CenC, a multidomain thermostable GH9 processive endoglucanase from Clostridium thermocellum: cloning, characterization and saccharification studies.

Authors:  Ikram ul Haq; Fatima Akram; Mahmood Ali Khan; Zahid Hussain; Ali Nawaz; Kaleem Iqbal; Ali Javed Shah
Journal:  World J Microbiol Biotechnol       Date:  2015-08-07       Impact factor: 3.312

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