Literature DB >> 17646647

Reversibility in nucleocytoplasmic transport.

Ronen Benjamine Kopito1, Michael Elbaum.   

Abstract

Nucleocytoplasmic exchange of proteins and RNAs is mediated by receptors that usher their cargo through the nuclear pores. Peptide localization signals on each cargo determine the receptors with which it will interact. Those interactions are normally regulated by the small GTPase Ran. Hydrolysis of GTP provides the chemical energy required to create a bona fide thermodynamic pump that selectively and directionally accumulates its substrates across the nuclear envelope. A common perception is that cargo delivery is irreversible, e.g., a protein imported to the nucleus does not return to the cytoplasm except perhaps via a specific export receptor. Quantitative measurements using cell-free nuclei reconstituted in Xenopus egg extract show that nuclear accumulation follows first-order kinetics and reaches steady state at a level that follows a Michaelis-Menten function of the cytoplasmic cargo concentration. This saturation suggests that receptor-mediated translocation across the nuclear pore occurs bidirectionally. The reversibility of accumulation was demonstrated directly by exchange of the cytosolic medium and by fluorescence recovery after photobleaching. Based on our results, we offer a simple biophysical model that predicts the observed behavior. A far-reaching consequence is that the nuclear localization signal dictates the fate of a protein population rather than that of the individual molecules that bear it, which remain free to shuttle back and forth. This implies an open communication between the nucleus and cytoplasm and a ubiquitous mechanism for signaling in both directions.

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Year:  2007        PMID: 17646647      PMCID: PMC1937537          DOI: 10.1073/pnas.0702690104

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  39 in total

1.  Kinetic analysis of translocation through nuclear pore complexes.

Authors:  K Ribbeck; D Görlich
Journal:  EMBO J       Date:  2001-03-15       Impact factor: 11.598

Review 2.  Transport between the cell nucleus and the cytoplasm.

Authors:  D Görlich; U Kutay
Journal:  Annu Rev Cell Dev Biol       Date:  1999       Impact factor: 13.827

3.  Nuclear pores form de novo from both sides of the nuclear envelope.

Authors:  Maximiliano A D'Angelo; Daniel J Anderson; Erin Richard; Martin W Hetzer
Journal:  Science       Date:  2006-04-21       Impact factor: 47.728

4.  Significant proportions of nuclear transport proteins with reduced intracellular mobilities resolved by fluorescence correlation spectroscopy.

Authors:  Allison Paradise; Mikhail K Levin; George Korza; John H Carson
Journal:  J Mol Biol       Date:  2006-10-04       Impact factor: 5.469

5.  Flexible phenylalanine-glycine nucleoporins as entropic barriers to nucleocytoplasmic transport.

Authors:  Roderick Y H Lim; Ning-Ping Huang; Joachim Köser; Jie Deng; K H Aaron Lau; Kyrill Schwarz-Herion; Birthe Fahrenkrog; Ueli Aebi
Journal:  Proc Natl Acad Sci U S A       Date:  2006-06-12       Impact factor: 11.205

6.  FG-rich repeats of nuclear pore proteins form a three-dimensional meshwork with hydrogel-like properties.

Authors:  Steffen Frey; Ralf P Richter; Dirk Görlich
Journal:  Science       Date:  2006-11-03       Impact factor: 47.728

7.  A systems analysis of importin-{alpha}-{beta} mediated nuclear protein import.

Authors:  Gregory Riddick; Ian G Macara
Journal:  J Cell Biol       Date:  2005-03-28       Impact factor: 10.539

8.  Nuclear import time and transport efficiency depend on importin beta concentration.

Authors:  Weidong Yang; Siegfried M Musser
Journal:  J Cell Biol       Date:  2006-09-18       Impact factor: 10.539

9.  Simple kinetic relationships and nonspecific competition govern nuclear import rates in vivo.

Authors:  Benjamin L Timney; Jaclyn Tetenbaum-Novatt; Diana S Agate; Rosemary Williams; Wenzhu Zhang; Brian T Chait; Michael P Rout
Journal:  J Cell Biol       Date:  2006-11-20       Impact factor: 10.539

10.  The nuclear pore complex.

Authors:  S Bagley; M W Goldberg; J M Cronshaw; S Rutherford; T D Allen
Journal:  J Cell Sci       Date:  2000-11       Impact factor: 5.285

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  37 in total

1.  Multiscale modeling of diffusion in the early Drosophila embryo.

Authors:  Christine Sample; Stanislav Y Shvartsman
Journal:  Proc Natl Acad Sci U S A       Date:  2010-05-17       Impact factor: 11.205

2.  Effects of multiple occupancy and interparticle interactions on selective transport through narrow channels: theory versus experiment.

Authors:  Anton Zilman
Journal:  Biophys J       Date:  2009-02-18       Impact factor: 4.033

Review 3.  Biology and biophysics of the nuclear pore complex and its components.

Authors:  Roderick Y H Lim; Katharine S Ullman; Birthe Fahrenkrog
Journal:  Int Rev Cell Mol Biol       Date:  2008       Impact factor: 6.813

4.  A simple kinetic model with explicit predictions for nuclear transport.

Authors:  Sanghyun Kim; M Elbaum
Journal:  Biophys J       Date:  2013-08-06       Impact factor: 4.033

5.  Enzymatically driven transport: a kinetic theory for nuclear export.

Authors:  Sanghyun Kim; M Elbaum
Journal:  Biophys J       Date:  2013-11-05       Impact factor: 4.033

6.  Diffusion of anionic and neutral GFP derivatives through plasmodesmata in epidermal cells of Nicotiana benthamiana.

Authors:  Svetlana Dashevskaya; Ronen Benjamine Kopito; Ran Friedman; Michael Elbaum; Bernard L Epel
Journal:  Protoplasma       Date:  2008-09-17       Impact factor: 3.356

7.  Cargo surface hydrophobicity is sufficient to overcome the nuclear pore complex selectivity barrier.

Authors:  Bracha Naim; David Zbaida; Shlomi Dagan; Ruti Kapon; Ziv Reich
Journal:  EMBO J       Date:  2009-08-13       Impact factor: 11.598

8.  Nucleocytoplasmic transport: a thermodynamic mechanism.

Authors:  Ronen Benjamine Kopito; Michael Elbaum
Journal:  HFSP J       Date:  2009-03-18

Review 9.  Protein Transport by the Nuclear Pore Complex: Simple Biophysics of a Complex Biomachine.

Authors:  Tijana Jovanovic-Talisman; Anton Zilman
Journal:  Biophys J       Date:  2017-07-11       Impact factor: 4.033

10.  Autonomy and robustness of translocation through the nuclear pore complex: a single-molecule study.

Authors:  Thomas Dange; David Grünwald; Antje Grünwald; Reiner Peters; Ulrich Kubitscheck
Journal:  J Cell Biol       Date:  2008-09-29       Impact factor: 10.539

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