Literature DB >> 18544502

Biology and biophysics of the nuclear pore complex and its components.

Roderick Y H Lim1, Katharine S Ullman, Birthe Fahrenkrog.   

Abstract

Nucleocytoplasmic exchange of proteins and ribonucleoprotein particles occurs via nuclear pore complexes (NPCs) that reside in the double membrane of the nuclear envelope (NE). Significant progress has been made during the past few years in obtaining better structural resolution of the three-dimensional architecture of NPC with the help of cryo-electron tomography and atomic structures of domains from nuclear pore proteins (nucleoporins). Biophysical and imaging approaches have helped elucidate how nucleoporins act as a selective barrier in nucleocytoplasmic transport. Nucleoporins act not only in trafficking of macromolecules but also in proper microtubule attachment to kinetochores, in the regulation of gene expression and signaling events associated with, for example, innate and adaptive immunity, development and neurodegenerative disorders. Recent research has also been focused on the dynamic processes of NPC assembly and disassembly that occur with each cell cycle. Here we review emerging results aimed at understanding the molecular arrangement of the NPC and how it is achieved, defining the roles of individual nucleoporins both at the NPC and at other sites within the cell, and finally deciphering how the NPC serves as both a barrier and a conduit of active transport.

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Year:  2008        PMID: 18544502      PMCID: PMC4366138          DOI: 10.1016/S1937-6448(08)00632-1

Source DB:  PubMed          Journal:  Int Rev Cell Mol Biol        ISSN: 1937-6448            Impact factor:   6.813


  240 in total

1.  The nuclear pore complex mystery and anomalous diffusion in reversible gels.

Authors:  Thomas Bickel; Robijn Bruinsma
Journal:  Biophys J       Date:  2002-12       Impact factor: 4.033

2.  Imaging of single-molecule translocation through nuclear pore complexes.

Authors:  Weidong Yang; Jeff Gelles; Siegfried M Musser
Journal:  Proc Natl Acad Sci U S A       Date:  2004-08-11       Impact factor: 11.205

3.  The Nup107-160 nucleoporin complex is required for correct bipolar spindle assembly.

Authors:  Arturo V Orjalo; Alexei Arnaoutov; Zhouxin Shen; Yekaterina Boyarchuk; Samantha G Zeitlin; Beatriz Fontoura; Steven Briggs; Mary Dasso; Douglass J Forbes
Journal:  Mol Biol Cell       Date:  2006-06-28       Impact factor: 4.138

4.  The nucleoporin RanBP2 has SUMO1 E3 ligase activity.

Authors:  Andrea Pichler; Andreas Gast; Jacob S Seeler; Anne Dejean; Frauke Melchior
Journal:  Cell       Date:  2002-01-11       Impact factor: 41.582

5.  Nucleocytoplasmic transport of proteins and poly(A)+ RNA in reconstituted Tpr-less nuclei in living mammalian cells.

Authors:  Satoshi Shibata; Yosuke Matsuoka; Yoshihiro Yoneda
Journal:  Genes Cells       Date:  2002-04       Impact factor: 1.891

6.  Nuclear pore complex number and distribution throughout the Saccharomyces cerevisiae cell cycle by three-dimensional reconstruction from electron micrographs of nuclear envelopes.

Authors:  M Winey; D Yarar; T H Giddings; D N Mastronarde
Journal:  Mol Biol Cell       Date:  1997-11       Impact factor: 4.138

7.  Nup358/RanBP2 attaches to the nuclear pore complex via association with Nup88 and Nup214/CAN and plays a supporting role in CRM1-mediated nuclear protein export.

Authors:  Rafael Bernad; Hella van der Velde; Maarten Fornerod; Helen Pickersgill
Journal:  Mol Cell Biol       Date:  2004-03       Impact factor: 4.272

8.  Direct interaction with nup153 mediates binding of Tpr to the periphery of the nuclear pore complex.

Authors:  Manuela E Hase; Volker C Cordes
Journal:  Mol Biol Cell       Date:  2003-05       Impact factor: 4.138

9.  Proteins connecting the nuclear pore complex with the nuclear interior.

Authors:  C Strambio-de-Castillia; G Blobel; M P Rout
Journal:  J Cell Biol       Date:  1999-03-08       Impact factor: 10.539

10.  Molecular architecture of the yeast nuclear pore complex: localization of Nsp1p subcomplexes.

Authors:  B Fahrenkrog; E C Hurt; U Aebi; N Panté
Journal:  J Cell Biol       Date:  1998-11-02       Impact factor: 10.539

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  41 in total

1.  Fluorescence anisotropy reveals order and disorder of protein domains in the nuclear pore complex.

Authors:  Alexa L Mattheyses; Martin Kampmann; Claire E Atkinson; Sanford M Simon
Journal:  Biophys J       Date:  2010-09-22       Impact factor: 4.033

Review 2.  The nuclear pore complex and nuclear transport.

Authors:  Susan R Wente; Michael P Rout
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-07-14       Impact factor: 10.005

3.  The C. elegans homolog of nucleoporin Nup98 is required for the integrity and function of germline P granules.

Authors:  Ekaterina Voronina; Geraldine Seydoux
Journal:  Development       Date:  2010-03-24       Impact factor: 6.868

4.  Hydrophilic linkers and polar contacts affect aggregation of FG repeat peptides.

Authors:  Nicole Dölker; Ulrich Zachariae; Helmut Grubmüller
Journal:  Biophys J       Date:  2010-06-02       Impact factor: 4.033

5.  Herpes simplex virus replication: roles of viral proteins and nucleoporins in capsid-nucleus attachment.

Authors:  Anna Maria Copeland; William W Newcomb; Jay C Brown
Journal:  J Virol       Date:  2008-12-10       Impact factor: 5.103

6.  Large cargo transport by nuclear pores: implications for the spatial organization of FG-nucleoporins.

Authors:  Li-Chun Tu; Guo Fu; Anton Zilman; Siegfried M Musser
Journal:  EMBO J       Date:  2013-11-08       Impact factor: 11.598

7.  Cargo surface hydrophobicity is sufficient to overcome the nuclear pore complex selectivity barrier.

Authors:  Bracha Naim; David Zbaida; Shlomi Dagan; Ruti Kapon; Ziv Reich
Journal:  EMBO J       Date:  2009-08-13       Impact factor: 11.598

8.  Simulations of nuclear pore transport yield mechanistic insights and quantitative predictions.

Authors:  Joshua S Mincer; Sanford M Simon
Journal:  Proc Natl Acad Sci U S A       Date:  2011-06-20       Impact factor: 11.205

9.  Integrating complex functions: coordination of nuclear pore complex assembly and membrane expansion of the nuclear envelope requires a family of integral membrane proteins.

Authors:  Roger Schneiter; Charles N Cole
Journal:  Nucleus       Date:  2010 Sep-Oct       Impact factor: 4.197

10.  Integral membrane proteins Brr6 and Apq12 link assembly of the nuclear pore complex to lipid homeostasis in the endoplasmic reticulum.

Authors:  Christine A Hodge; Vineet Choudhary; Michael J Wolyniak; John J Scarcelli; Roger Schneiter; Charles N Cole
Journal:  J Cell Sci       Date:  2010-01-01       Impact factor: 5.285

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