Literature DB >> 19680225

Cargo surface hydrophobicity is sufficient to overcome the nuclear pore complex selectivity barrier.

Bracha Naim1, David Zbaida, Shlomi Dagan, Ruti Kapon, Ziv Reich.   

Abstract

To fulfil their function, nuclear pore complexes (NPCs) must discriminate between inert proteins and nuclear transport receptors (NTRs), admitting only the latter. This specific permeation is thought to depend on interactions between hydrophobic patches on NTRs and phenylalanine-glycine (FG) or related repeats that line the NPC. Here, we tested this premise directly by conjugating different hydrophobic amino-acid analogues to the surface of an inert protein and examining its ability to cross NPCs unassisted by NTRs. Conjugation of as few as four hydrophobic moieties was sufficient to enable passage of the protein through NPCs. Transport of the modified protein proceeded with rates comparable to those measured for the innate protein when bound to an NTR and was relatively insensitive both to the nature and density of the amino acids used to confer hydrophobicity. The latter observation suggests a non-specific, small, and plant interaction network between cargo and FG repeats.

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Year:  2009        PMID: 19680225      PMCID: PMC2750018          DOI: 10.1038/emboj.2009.225

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  65 in total

1.  Kinetic analysis of translocation through nuclear pore complexes.

Authors:  K Ribbeck; D Görlich
Journal:  EMBO J       Date:  2001-03-15       Impact factor: 11.598

Review 2.  Transport into and out of the nucleus.

Authors:  I G Macara
Journal:  Microbiol Mol Biol Rev       Date:  2001-12       Impact factor: 11.056

Review 3.  Virtual gating and nuclear transport: the hole picture.

Authors:  Michael P Rout; John D Aitchison; Marcelo O Magnasco; Brian T Chait
Journal:  Trends Cell Biol       Date:  2003-12       Impact factor: 20.808

4.  Pores for thought: nuclear pore complex proteins.

Authors:  M P Rout; S R Wente
Journal:  Trends Cell Biol       Date:  1994-10       Impact factor: 20.808

5.  Diffusion model of solute dynamics in a membrane channel: mapping onto the two-site model and optimizing the flux.

Authors:  Sergey M Bezrukov; Alexander M Berezhkovskii; Attila Szabo
Journal:  J Chem Phys       Date:  2007-09-21       Impact factor: 3.488

6.  A pathway separate from the central channel through the nuclear pore complex for inorganic ions and small macromolecules.

Authors:  Armin Kramer; Yvonne Ludwig; Victor Shahin; Hans Oberleithner
Journal:  J Biol Chem       Date:  2007-08-28       Impact factor: 5.157

Review 7.  Nucleocytoplasmic transport: the soluble phase.

Authors:  I W Mattaj; L Englmeier
Journal:  Annu Rev Biochem       Date:  1998       Impact factor: 23.643

8.  Functional analysis of the hydrophobic patch on nuclear transport factor 2 involved in interactions with the nuclear pore in vivo.

Authors:  B B Quimby; S W Leung; R Bayliss; M T Harreman; G Thirumala; M Stewart; A H Corbett
Journal:  J Biol Chem       Date:  2001-08-06       Impact factor: 5.157

9.  Artificial nanopores that mimic the transport selectivity of the nuclear pore complex.

Authors:  Tijana Jovanovic-Talisman; Jaclyn Tetenbaum-Novatt; Anna Sophia McKenney; Anton Zilman; Reiner Peters; Michael P Rout; Brian T Chait
Journal:  Nature       Date:  2008-12-21       Impact factor: 49.962

10.  Cse1p-binding dynamics reveal a binding pattern for FG-repeat nucleoporins on transport receptors.

Authors:  Timothy A Isgro; Klaus Schulten
Journal:  Structure       Date:  2007-08       Impact factor: 5.006

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  35 in total

1.  A bimodal distribution of two distinct categories of intrinsically disordered structures with separate functions in FG nucleoporins.

Authors:  Justin Yamada; Joshua L Phillips; Samir Patel; Gabriel Goldfien; Alison Calestagne-Morelli; Hans Huang; Ryan Reza; Justin Acheson; Viswanathan V Krishnan; Shawn Newsam; Ajay Gopinathan; Edmond Y Lau; Michael E Colvin; Vladimir N Uversky; Michael F Rexach
Journal:  Mol Cell Proteomics       Date:  2010-04-05       Impact factor: 5.911

Review 2.  How to operate a nuclear pore complex by Kap-centric control.

Authors:  Roderick Y H Lim; Binlu Huang; Larisa E Kapinos
Journal:  Nucleus       Date:  2015       Impact factor: 4.197

3.  Large cargo transport by nuclear pores: implications for the spatial organization of FG-nucleoporins.

Authors:  Li-Chun Tu; Guo Fu; Anton Zilman; Siegfried M Musser
Journal:  EMBO J       Date:  2013-11-08       Impact factor: 11.598

4.  Enzymatically driven transport: a kinetic theory for nuclear export.

Authors:  Sanghyun Kim; M Elbaum
Journal:  Biophys J       Date:  2013-11-05       Impact factor: 4.033

5.  Biophysical coarse-grained modeling provides insights into transport through the nuclear pore complex.

Authors:  R Moussavi-Baygi; Y Jamali; R Karimi; M R K Mofrad
Journal:  Biophys J       Date:  2011-03-16       Impact factor: 4.033

6.  Permeating the nuclear pore complex.

Authors:  Ruti Kapon; Bracha Naim; David Zbaida; Reinat Nevo; Onie Tsabari; Ziv Reich
Journal:  Nucleus       Date:  2010-07-22       Impact factor: 4.197

7.  MD simulations and FRET reveal an environment-sensitive conformational plasticity of importin-β.

Authors:  Kangkan Halder; Nicole Dölker; Qui Van; Ingo Gregor; Achim Dickmanns; Imke Baade; Ralph H Kehlenbach; Ralf Ficner; Jörg Enderlein; Helmut Grubmüller; Heinz Neumann
Journal:  Biophys J       Date:  2015-07-21       Impact factor: 4.033

Review 8.  The coming-of-age of nucleocytoplasmic transport in motor neuron disease and neurodegeneration.

Authors:  Paulo A Ferreira
Journal:  Cell Mol Life Sci       Date:  2019-02-11       Impact factor: 9.261

Review 9.  The Structure of the Nuclear Pore Complex (An Update).

Authors:  Daniel H Lin; André Hoelz
Journal:  Annu Rev Biochem       Date:  2019-03-18       Impact factor: 23.643

10.  The mechanistic role of alpha-synuclein in the nucleus: impaired nuclear function caused by familial Parkinson's disease SNCA mutations.

Authors:  Vivian Chen; Malik Moncalvo; Dominic Tringali; Lidia Tagliafierro; Ahila Shriskanda; Ekaterina Ilich; Wendy Dong; Boris Kantor; Ornit Chiba-Falek
Journal:  Hum Mol Genet       Date:  2020-11-04       Impact factor: 6.150

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