Literature DB >> 17634646

Spectrally resolved bioluminescence tomography with adaptive finite element analysis: methodology and simulation.

Yujie Lv1, Jie Tian, Wenxiang Cong, Ge Wang, Wei Yang, Chenghu Qin, Min Xu.   

Abstract

As a molecular imaging technique, bioluminescence tomography (BLT) with its highly sensitive detection and facile operation can significantly reveal molecular and cellular information in vivo at the whole-body small animal level. However, because of complex photon transportation in biological tissue and boundary detection data with high noise, bioluminescent sources in deeper positions generally cannot be localized. In our previous work, we used achromatic or monochromatic measurements and an a priori permissible source region strategy to develop a multilevel adaptive finite-element algorithm. In this paper, we propose a spectrally solved tomographic algorithm with a posteriori permissible source region selection. Multispectral measurements, and anatomical and optical information first deal with the nonuniqueness of BLT and constrain the possible solution of source reconstruction. The use of adaptive mesh refinement and permissible source region based on a posteriori measures not only avoids the dimension disaster arising from the multispectral measured data but also reduces the ill-posedness of BLT and therefore improves the reconstruction quality. Reconsideration of the optimization method and related modifications further enhance reconstruction robustness and efficiency. We also incorporate into the method some improvements for reducing computational burdens. Finally, using a whole-body virtual mouse phantom, we demonstrate the capability of the proposed BLT algorithm to reconstruct accurately bioluminescent sources in deeper positions. In terms of optical property errors and two sources of discernment in deeper positions, this BLT algorithm represents the unique predominance for BLT reconstruction.

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Year:  2007        PMID: 17634646     DOI: 10.1088/0031-9155/52/15/009

Source DB:  PubMed          Journal:  Phys Med Biol        ISSN: 0031-9155            Impact factor:   3.609


  14 in total

1.  Fast iterative image reconstruction methods for fully 3D multispectral bioluminescence tomography.

Authors:  Sangtae Ahn; Abhijit J Chaudhari; Felix Darvas; Charles A Bouman; Richard M Leahy
Journal:  Phys Med Biol       Date:  2008-06-30       Impact factor: 3.609

2.  In vivo bioluminescence tomography with a blocking-off finite-difference SP3 method and MRI/CT coregistration.

Authors:  Alexander D Klose; Bradley J Beattie; Hamid Dehghani; Lena Vider; Carl Le; Vladimir Ponomarev; Ronald Blasberg
Journal:  Med Phys       Date:  2010-01       Impact factor: 4.071

3.  Incorporating MRI structural information into bioluminescence tomography: system, heterogeneous reconstruction and in vivo quantification.

Authors:  Jun Zhang; Duofang Chen; Jimin Liang; Huadan Xue; Jing Lei; Qin Wang; Dongmei Chen; Ming Meng; Zhengyu Jin; Jie Tian
Journal:  Biomed Opt Express       Date:  2014-05-20       Impact factor: 3.732

4.  Comparative studies of l(p)-regularization-based reconstruction algorithms for bioluminescence tomography.

Authors:  Qitan Zhang; Xueli Chen; Xiaochao Qu; Jimin Liang; Jie Tian
Journal:  Biomed Opt Express       Date:  2012-10-23       Impact factor: 3.732

5.  Excitation-resolved fluorescence tomography with simplified spherical harmonics equations.

Authors:  Alexander D Klose; Thomas Pöschinger
Journal:  Phys Med Biol       Date:  2011-02-15       Impact factor: 3.609

6.  Experimental bioluminescence tomography with fully parallel radiative-transfer-based reconstruction framework.

Authors:  Yujie Lu; Hidevaldo B Machado; Ali Douraghy; David Stout; Harvey Herschman; Arion F Chatziioannou
Journal:  Opt Express       Date:  2009-09-14       Impact factor: 3.894

7.  A Parallel Adaptive Finite Element Method for the Simulation of Photon Migration with the Radiative-Transfer-Based Model.

Authors:  Yujie Lu; Arion F Chatziioannou
Journal:  Commun Numer Methods Eng       Date:  2009

8.  Spectrally resolved bioluminescence tomography with the third-order simplified spherical harmonics approximation.

Authors:  Yujie Lu; Ali Douraghy; Hidevaldo B Machado; David Stout; Jie Tian; Harvey Herschman; Arion F Chatziioannou
Journal:  Phys Med Biol       Date:  2009-10-09       Impact factor: 3.609

9.  Source reconstruction for spectrally-resolved bioluminescence tomography with sparse a priori information.

Authors:  Yujie Lu; Xiaoqun Zhang; Ali Douraghy; David Stout; Jie Tian; Tony F Chan; Arion F Chatziioannou
Journal:  Opt Express       Date:  2009-05-11       Impact factor: 3.894

10.  A generalized hybrid algorithm for bioluminescence tomography.

Authors:  Shengkun Shi; Heng Mao
Journal:  Biomed Opt Express       Date:  2013-04-10       Impact factor: 3.732

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