Literature DB >> 19434138

Source reconstruction for spectrally-resolved bioluminescence tomography with sparse a priori information.

Yujie Lu1, Xiaoqun Zhang, Ali Douraghy, David Stout, Jie Tian, Tony F Chan, Arion F Chatziioannou.   

Abstract

Through restoration of the light source information in small animals in vivo, optical molecular imaging, such as fluorescence molecular tomography (FMT) and bioluminescence tomography (BLT), can depict biological and physiological changes observed using molecular probes. A priori information plays an indispensable role in tomographic reconstruction. As a type of a priori information, the sparsity characteristic of the light source has not been sufficiently considered to date. In this paper, we introduce a compressed sensing method to develop a new tomographic algorithm for spectrally-resolved bioluminescence tomography. This method uses the nature of the source sparsity to improve the reconstruction quality with a regularization implementation. Based on verification of the inverse crime, the proposed algorithm is validated with Monte Carlo-based synthetic data and the popular Tikhonov regularization method. Testing with different noise levels and single/multiple source settings at different depths demonstrates the improved performance of this algorithm. Experimental reconstruction with a mouse-shaped phantom further shows the potential of the proposed algorithm.

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Year:  2009        PMID: 19434138      PMCID: PMC2790869          DOI: 10.1364/oe.17.008062

Source DB:  PubMed          Journal:  Opt Express        ISSN: 1094-4087            Impact factor:   3.894


  24 in total

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Authors:  R Weissleder; U Mahmood
Journal:  Radiology       Date:  2001-05       Impact factor: 11.105

2.  Active constrained truncated Newton method for simple-bound optical tomography

Authors: 
Journal:  J Opt Soc Am A Opt Image Sci Vis       Date:  2000-09       Impact factor: 2.129

3.  A mouse optical simulation environment (MOSE) to investigate bioluminescent phenomena in the living mouse with the Monte Carlo method.

Authors:  Hui Li; Jie Tian; Fuping Zhu; Wenxiang Cong; Lihong V Wang; Eric A Hoffman; Ge Wang
Journal:  Acad Radiol       Date:  2004-09       Impact factor: 3.173

4.  Uniqueness theorems in bioluminescence tomography.

Authors:  Ge Wang; Yi Li; Ming Jiang
Journal:  Med Phys       Date:  2004-08       Impact factor: 4.071

5.  Determining the optical properties of turbid mediaby using the adding-doubling method.

Authors:  S A Prahl; M J van Gemert; A J Welch
Journal:  Appl Opt       Date:  1993-02-01       Impact factor: 1.980

Review 6.  Looking and listening to light: the evolution of whole-body photonic imaging.

Authors:  Vasilis Ntziachristos; Jorge Ripoll; Lihong V Wang; Ralph Weissleder
Journal:  Nat Biotechnol       Date:  2005-03       Impact factor: 54.908

7.  A born-type approximation method for bioluminescence tomography.

Authors:  Wenxiang Cong; Kumar Durairaj; Lihong V Wang; Ge Wang
Journal:  Med Phys       Date:  2006-03       Impact factor: 4.071

8.  Spectrally resolved bioluminescence optical tomography.

Authors:  Hamid Dehghani; Scott C Davis; Shudong Jiang; Brian W Pogue; Keith D Paulsen; Michael S Patterson
Journal:  Opt Lett       Date:  2006-02-01       Impact factor: 3.776

9.  Spectrally resolved bioluminescence tomography with adaptive finite element analysis: methodology and simulation.

Authors:  Yujie Lv; Jie Tian; Wenxiang Cong; Ge Wang; Wei Yang; Chenghu Qin; Min Xu
Journal:  Phys Med Biol       Date:  2007-07-03       Impact factor: 3.609

10.  Temperature-modulated bioluminescence tomography.

Authors:  Ge Wang; Haiou Shen; Wenxiang Cong; Shan Zhao; Guo Wei Wei
Journal:  Opt Express       Date:  2006-08-21       Impact factor: 3.894

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  30 in total

1.  Sparse Reconstruction of Fluorescence Molecular Tomography Using Variable Splitting and Alternating Direction Scheme.

Authors:  Jinzuo Ye; Yang Du; Yu An; Yamin Mao; Shixin Jiang; Wenting Shang; Kunshan He; Xin Yang; Kun Wang; Chongwei Chi; Jie Tian
Journal:  Mol Imaging Biol       Date:  2018-02       Impact factor: 3.488

2.  Filtered maximum likelihood expectation maximization based global reconstruction for bioluminescence tomography.

Authors:  Defu Yang; Lin Wang; Dongmei Chen; Chenggang Yan; Xiaowei He; Jimin Liang; Xueli Chen
Journal:  Med Biol Eng Comput       Date:  2018-05-17       Impact factor: 2.602

3.  Monte Carlo fluorescence microtomography.

Authors:  Alexander X Cong; Matthias C Hofmann; Wenxiang Cong; Yong Xu; Ge Wang
Journal:  J Biomed Opt       Date:  2011-07       Impact factor: 3.170

4.  Reconstruction of localized fluorescent target from multi-view continuous-wave surface images of small animal with lp sparsity regularization.

Authors:  Shinpei Okawa; Tatsuya Ikehara; Ichiro Oda; Yukio Yamada
Journal:  Biomed Opt Express       Date:  2014-05-19       Impact factor: 3.732

5.  Novel l 2,1-norm optimization method for fluorescence molecular tomography reconstruction.

Authors:  Shixin Jiang; Jie Liu; Yu An; Guanglei Zhang; Jinzuo Ye; Yamin Mao; Kunshan He; Chongwei Chi; Jie Tian
Journal:  Biomed Opt Express       Date:  2016-05-23       Impact factor: 3.732

6.  Systematic study of target localization for bioluminescence tomography guided radiation therapy.

Authors:  Jingjing Yu; Bin Zhang; Iulian I Iordachita; Juvenal Reyes; Zhihao Lu; Malcolm V Brock; Michael S Patterson; John W Wong; Ken Kang-Hsin Wang
Journal:  Med Phys       Date:  2016-05       Impact factor: 4.071

7.  Comparative studies of l(p)-regularization-based reconstruction algorithms for bioluminescence tomography.

Authors:  Qitan Zhang; Xueli Chen; Xiaochao Qu; Jimin Liang; Jie Tian
Journal:  Biomed Opt Express       Date:  2012-10-23       Impact factor: 3.732

8.  Lensless wide-field fluorescent imaging on a chip using compressive decoding of sparse objects.

Authors:  Ahmet F Coskun; Ikbal Sencan; Ting-Wei Su; Aydogan Ozcan
Journal:  Opt Express       Date:  2010-05-10       Impact factor: 3.894

9.  Truncated total least squares method with a practical truncation parameter choice scheme for bioluminescence tomography inverse problem.

Authors:  Xiaowei He; Jimin Liang; Xiaochao Qu; Heyu Huang; Yanbin Hou; Jie Tian
Journal:  Int J Biomed Imaging       Date:  2010-05-19

10.  Čerenkov excited fluorescence tomography using external beam radiation.

Authors:  Jennifer-Lynn Demers; Scott C Davis; Rongxiao Zhang; David J Gladstone; Brian W Pogue
Journal:  Opt Lett       Date:  2013-04-15       Impact factor: 3.776

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