Literature DB >> 17623783

Poxviruses as possible vectors for horizontal transfer of retroposons from reptiles to mammals.

Oliver Piskurek1, Norihiro Okada.   

Abstract

Poxviruses (Poxviridae) are a family of double-stranded DNA viruses with no RNA stage. Members of the genus Orthopoxvirus (OPV) are highly invasive and virulent. It was recently shown that the taterapox virus (TATV) from a West African rodent is the sister of camelpox virus and therefore belongs to the clade closest to the variola virus (VARV), the etiological agent of smallpox. Although these OPVs are among the most dreaded pathogens on Earth, our current knowledge of their genomes, their origins, and their possible hosts is still very limited. Here, we report the horizontal transfer of a retroposon (known only from reptilian genomes) to the TATV genome. After isolating and analyzing different subfamilies of short interspersed elements (SINEs) from lizards and snakes, we identified a highly poisonous snake (Echis ocellatus) from West Africa as the closest species from which the SINE sequence discovered in the TATV genome (TATV-SINE) was transferred to the virus. We discovered direct repeats derived from the virus flanking the TATV-SINE, and the absence of any snake-derived DNA flanking the SINE. These data provide strong evidence that the TATV-SINE was actually transferred within the snake to the viral genome by retrotransposition and not by any horizontal transfer at the DNA level. We propose that the snake is another host for TATV, suggesting that VARV-related epidemiologically relevant viruses may have derived from our cold-blooded ancestors and that poxviruses are possible vectors for horizontal transfer of retroposons from reptiles to mammals.

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Year:  2007        PMID: 17623783      PMCID: PMC1924541          DOI: 10.1073/pnas.0700531104

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  44 in total

1.  The age and evolution of non-LTR retrotransposable elements.

Authors:  H S Malik; W D Burke; T H Eickbush
Journal:  Mol Biol Evol       Date:  1999-06       Impact factor: 16.240

2.  LINEs mobilize SINEs in the eel through a shared 3' sequence.

Authors:  Masaki Kajikawa; Norihiro Okada
Journal:  Cell       Date:  2002-11-01       Impact factor: 41.582

3.  Early evolution of the venom system in lizards and snakes.

Authors:  Bryan G Fry; Nicolas Vidal; Janette A Norman; Freek J Vonk; Holger Scheib; S F Ryan Ramjan; Sanjaya Kuruppu; Kim Fung; S Blair Hedges; Michael K Richardson; Wayne C Hodgson; Vera Ignjatovic; Robyn Summerhayes; Elazar Kochva
Journal:  Nature       Date:  2005-11-16       Impact factor: 49.962

4.  The 3' ends of tRNA-derived SINEs originated from the 3' ends of LINEs: a new example from the bovine genome.

Authors:  N Okada; M Hamada
Journal:  J Mol Evol       Date:  1997       Impact factor: 2.395

5.  Molecular evidence from retroposons that whales form a clade within even-toed ungulates.

Authors:  M Shimamura; H Yasue; K Ohshima; H Abe; H Kato; T Kishiro; M Goto; I Munechika; N Okada
Journal:  Nature       Date:  1997-08-14       Impact factor: 49.962

6.  Reticuloendotheliosis virus (REV) long terminal repeats incorporated in the genomes of commercial fowl poxvirus vaccines and pigeon poxviruses without indication of the presence of infectious REV.

Authors:  K M Moore; J R Davis; T Sato; A Yasuda
Journal:  Avian Dis       Date:  2000 Oct-Dec       Impact factor: 1.577

7.  Reticuloendotheliosis virus integration in the fowl poxvirus genome: not a recent event.

Authors:  T J Kim; D N Tripathy
Journal:  Avian Dis       Date:  2001 Jul-Sep       Impact factor: 1.577

8.  CORE-SINEs: eukaryotic short interspersed retroposing elements with common sequence motifs.

Authors:  N Gilbert; D Labuda
Journal:  Proc Natl Acad Sci U S A       Date:  1999-03-16       Impact factor: 11.205

9.  Sauria SINEs: Novel short interspersed retroposable elements that are widespread in reptile genomes.

Authors:  Oliver Piskurek; Christopher C Austin; Norihiro Okada
Journal:  J Mol Evol       Date:  2006-04-11       Impact factor: 2.395

10.  Retroposed elements as archives for the evolutionary history of placental mammals.

Authors:  Jan Ole Kriegs; Gennady Churakov; Martin Kiefmann; Ursula Jordan; Jürgen Brosius; Jürgen Schmitz
Journal:  PLoS Biol       Date:  2006-03-14       Impact factor: 8.029

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  66 in total

1.  A role for host-parasite interactions in the horizontal transfer of transposons across phyla.

Authors:  Clément Gilbert; Sarah Schaack; John K Pace; Paul J Brindley; Cédric Feschotte
Journal:  Nature       Date:  2010-04-29       Impact factor: 49.962

2.  Phantom, a new subclass of Mutator DNA transposons found in insect viruses and widely distributed in animals.

Authors:  Claudia P Marquez; Ellen J Pritham
Journal:  Genetics       Date:  2010-05-10       Impact factor: 4.562

3.  Host RNAs, including transposons, are encapsidated by a eukaryotic single-stranded RNA virus.

Authors:  Andrew Routh; Tatiana Domitrovic; John E Johnson
Journal:  Proc Natl Acad Sci U S A       Date:  2012-01-24       Impact factor: 11.205

4.  Molecular characterization, genomic distribution and evolutionary dynamics of Short INterspersed Elements in the termite genome.

Authors:  Andrea Luchetti; Barbara Mantovani
Journal:  Mol Genet Genomics       Date:  2010-12-24       Impact factor: 3.291

Review 5.  Transposable elements as drivers of genomic and biological diversity in vertebrates.

Authors:  Astrid Böhne; Frédéric Brunet; Delphine Galiana-Arnoux; Christina Schultheis; Jean-Nicolas Volff
Journal:  Chromosome Res       Date:  2008       Impact factor: 5.239

6.  Horizontal SPINning of transposons.

Authors:  Clément Gilbert; John K Pace; Cédric Feschotte
Journal:  Commun Integr Biol       Date:  2009

7.  Horizontal transfer of transposable elements in plants.

Authors:  Philippe M Fortune; Anne Roulin; Olivier Panaud
Journal:  Commun Integr Biol       Date:  2008

8.  The evolutionary history of mariner-like elements in Neotropical drosophilids.

Authors:  Gabriel Luz Wallau; Aurelie Hua-Van; Pierre Capy; Elgion L S Loreto
Journal:  Genetica       Date:  2011-02-20       Impact factor: 1.082

9.  Rampant horizontal transfer of SPIN transposons in squamate reptiles.

Authors:  Clément Gilbert; Sharon S Hernandez; Jaime Flores-Benabib; Eric N Smith; Cédric Feschotte
Journal:  Mol Biol Evol       Date:  2011-07-18       Impact factor: 16.240

10.  Multiple waves of recent DNA transposon activity in the bat, Myotis lucifugus.

Authors:  David A Ray; Cedric Feschotte; Heidi J T Pagan; Jeremy D Smith; Ellen J Pritham; Peter Arensburger; Peter W Atkinson; Nancy L Craig
Journal:  Genome Res       Date:  2008-03-13       Impact factor: 9.043

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