Literature DB >> 19513203

Horizontal transfer of transposable elements in plants.

Philippe M Fortune1, Anne Roulin, Olivier Panaud.   

Abstract

The analysis of genomes suggests that horizontal transfers are frequent phenomena. In eukaryotes these transfers often involve transposable elements and can be detected by sequence analysis or phylogenetic reconstruction. Nevertheless, the dynamics of transposable elements and reticulation in species history, especially in plants, can sometimes be misleading. While the horizontal transfer of transposable elements is well documented in animals, only two cases have been described in plants despite the abundance of these elements in plant genomes. The study of horizontal transfers of transposable elements in plants represents a new challenge to understand their impact on genomic diversity and consequently on the process of adaptation to their environment.

Keywords:  evolution; horizontal transfer; phylogeny; potential vectors; transposable elements

Year:  2008        PMID: 19513203      PMCID: PMC2633806          DOI: 10.4161/cib.1.1.6328

Source DB:  PubMed          Journal:  Commun Integr Biol        ISSN: 1942-0889


  46 in total

1.  Transcriptional activation of retrotransposons alters the expression of adjacent genes in wheat.

Authors:  Khalil Kashkush; Moshe Feldman; Avraham A Levy
Journal:  Nat Genet       Date:  2002-12-16       Impact factor: 38.330

Review 2.  Horizontal and vertical gene transfer: the life history of pathogens.

Authors:  Jeffrey G Lawrence
Journal:  Contrib Microbiol       Date:  2005

Review 3.  Transposable elements and the evolution of regulatory networks.

Authors:  Cédric Feschotte
Journal:  Nat Rev Genet       Date:  2008-05       Impact factor: 53.242

4.  Massive horizontal transfer of mitochondrial genes from diverse land plant donors to the basal angiosperm Amborella.

Authors:  Ulfar Bergthorsson; Aaron O Richardson; Gregory J Young; Leslie R Goertzen; Jeffrey D Palmer
Journal:  Proc Natl Acad Sci U S A       Date:  2004-12-14       Impact factor: 11.205

5.  Genome fragment of Wolbachia endosymbiont transferred to X chromosome of host insect.

Authors:  Natsuko Kondo; Naruo Nikoh; Nobuyuki Ijichi; Masakazu Shimada; Takema Fukatsu
Journal:  Proc Natl Acad Sci U S A       Date:  2002-10-17       Impact factor: 11.205

6.  Genomic paleontology provides evidence for two distinct origins of Asian rice (Oryza sativa L.).

Authors:  C Vitte; T Ishii; F Lamy; D Brar; O Panaud
Journal:  Mol Genet Genomics       Date:  2004-10-16       Impact factor: 3.291

7.  Species sympatry and horizontal transfers of Mariner transposons in marine crustacean genomes.

Authors:  N Casse; Q T Bui; V Nicolas; S Renault; Y Bigot; M Laulier
Journal:  Mol Phylogenet Evol       Date:  2006-05-11       Impact factor: 4.286

8.  Recent horizontal transfer of a mariner transposable element among and between Diptera and Neuroptera.

Authors:  H M Robertson; D J Lampe
Journal:  Mol Biol Evol       Date:  1995-09       Impact factor: 16.240

9.  A new computational method for the detection of horizontal gene transfer events.

Authors:  Aristotelis Tsirigos; Isidore Rigoutsos
Journal:  Nucleic Acids Res       Date:  2005-02-16       Impact factor: 16.971

10.  Polygalacturonase from Sitophilus oryzae: possible horizontal transfer of a pectinase gene from fungi to weevils.

Authors:  Zhicheng Shen; Michael Denton; Navdeep Mutti; Kirk Pappan; Michael R Kanost; John C Reese; Gerald R Reeck
Journal:  J Insect Sci       Date:  2003-08-12       Impact factor: 1.857

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  16 in total

1.  Diversity and evolution of Ty1-copia retroelements in representative tribes of Bambusoideae subfamily.

Authors:  Ming-bing Zhou; Hao Zhong; Qin-hui Zhang; Ke-Xuan Tang; Ding-Qin Tang
Journal:  Genetica       Date:  2010-06-25       Impact factor: 1.082

2.  Isolation and characterization of seventy-nine full-length mariner-like transposase genes in the Bambusoideae subfamily.

Authors:  Ming-Bing Zhou; Hao Zhong; Ding-Qin Tang
Journal:  J Plant Res       Date:  2010-12-17       Impact factor: 2.629

3.  Large distribution and high sequence identity of a Copia-type retrotransposon in angiosperm families.

Authors:  Elaine Silva Dias; Clémence Hatt; Serge Hamon; Perla Hamon; Michel Rigoreau; Dominique Crouzillat; Claudia Marcia Aparecida Carareto; Alexandre de Kochko; Romain Guyot
Journal:  Plant Mol Biol       Date:  2015-08-06       Impact factor: 4.076

Review 4.  Horizontal gene transfer in plants.

Authors:  Caihua Gao; Xiaodong Ren; Annaliese S Mason; Honglei Liu; Meili Xiao; Jiana Li; Donghui Fu
Journal:  Funct Integr Genomics       Date:  2013-10-17       Impact factor: 3.410

5.  Guidelines for the Choice of Sequences for Molecular Plant Taxonomy.

Authors:  Pascale Besse
Journal:  Methods Mol Biol       Date:  2021

6.  The Tvv1 retrotransposon family is conserved between plant genomes separated by over 100 million years.

Authors:  Cédric Moisy; Alan H Schulman; Ruslan Kalendar; Jan P Buchmann; Frédérique Pelsy
Journal:  Theor Appl Genet       Date:  2014-03-04       Impact factor: 5.699

Review 7.  Horizontal transposon transfer in eukarya: detection, bias, and perspectives.

Authors:  Gabriel Luz Wallau; Mauro Freitas Ortiz; Elgion Lucio Silva Loreto
Journal:  Genome Biol Evol       Date:  2012-07-12       Impact factor: 3.416

8.  Whole genome surveys of rice, maize and sorghum reveal multiple horizontal transfers of the LTR-retrotransposon Route66 in Poaceae.

Authors:  Anne Roulin; Benoit Piegu; Philippe M Fortune; François Sabot; Angélique D'Hont; Domenica Manicacci; Olivier Panaud
Journal:  BMC Evol Biol       Date:  2009-03-16       Impact factor: 3.260

Review 9.  Constraint and opportunity in genome innovation.

Authors:  James A Shapiro
Journal:  RNA Biol       Date:  2013-12-20       Impact factor: 4.652

10.  Microsporidian genomes harbor a diverse array of transposable elements that demonstrate an ancestry of horizontal exchange with metazoans.

Authors:  Nicolas Parisot; Adrian Pelin; Cyrielle Gasc; Valérie Polonais; Abdel Belkorchia; Johan Panek; Hicham El Alaoui; David G Biron; Emilie Brasset; Chantal Vaury; Pierre Peyret; Nicolas Corradi; Éric Peyretaillade; Emmanuelle Lerat
Journal:  Genome Biol Evol       Date:  2014-08-28       Impact factor: 3.416

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