Literature DB >> 17586771

Crystal structures of TM0549 and NE1324--two orthologs of E. coli AHAS isozyme III small regulatory subunit.

Janusz J Petkowski1, Maksymilian Chruszcz, Matthew D Zimmerman, Heping Zheng, Tatiana Skarina, Olena Onopriyenko, Marcin T Cymborowski, Katarzyna D Koclega, Alexei Savchenko, Aled Edwards, Wladek Minor.   

Abstract

Crystal structures of two orthologs of the regulatory subunit of acetohydroxyacid synthase III (AHAS, EC 2.2.1.6) from Thermotoga maritima (TM0549) and Nitrosomonas europea (NE1324) were determined by single-wavelength anomalous diffraction methods with the use of selenomethionine derivatives at 2.3 A and 2.5 A, respectively. TM0549 and NE1324 share the same fold, and in both proteins the polypeptide chain contains two separate domains of a similar size. Each protein contains a C-terminal domain with ferredoxin-type fold and an N-terminal ACT domain, of which the latter is characteristic for several proteins involved in amino acid metabolism. The ferredoxin domain is stabilized by a calcium ion in the crystal structure of NE1324 and by a Mg(H2O)(6)2+ ion in TM0549. Both TM0549 and NE1324 form dimeric assemblies in the crystal lattice.

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Year:  2007        PMID: 17586771      PMCID: PMC2206681          DOI: 10.1110/ps.072793807

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  39 in total

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Authors:  Sharon Mendel; Michael Vinogradov; Maria Vyazmensky; David M Chipman; Ze'ev Barak
Journal:  J Mol Biol       Date:  2003-01-10       Impact factor: 5.469

2.  Automated structure solution, density modification and model building.

Authors:  Thomas C Terwilliger
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2002-10-21

3.  Substructure solution with SHELXD.

Authors:  Thomas R Schneider; George M Sheldrick
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2002-09-28

4.  Structure of the regulatory subunit of acetohydroxyacid synthase isozyme III from Escherichia coli.

Authors:  Alexander Kaplun; Maria Vyazmensky; Yuri Zherdev; Inna Belenky; Alex Slutzker; Sharon Mendel; Ze'ev Barak; David M Chipman; Boaz Shaanan
Journal:  J Mol Biol       Date:  2006-01-18       Impact factor: 5.469

5.  The ACT domain family.

Authors:  D M Chipman; B Shaanan
Journal:  Curr Opin Struct Biol       Date:  2001-12       Impact factor: 6.809

6.  The open conformation of a Pseudomonas lipase.

Authors:  J D Schrag; Y Li; M Cygler; D Lang; T Burgdorf; H J Hecht; R Schmid; D Schomburg; T J Rydel; J D Oliver; L C Strickland; C M Dunaway; S B Larson; J Day; A McPherson
Journal:  Structure       Date:  1997-02-15       Impact factor: 5.006

7.  Expression, purification, characterization, and reconstitution of the large and small subunits of yeast acetohydroxyacid synthase.

Authors:  S S Pang; R G Duggleby
Journal:  Biochemistry       Date:  1999-04-20       Impact factor: 3.162

8.  Automated MAD and MIR structure solution.

Authors:  T C Terwilliger; J Berendzen
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1999-04

9.  The prediction and characterization of metal binding sites in proteins.

Authors:  D S Gregory; A C Martin; J C Cheetham; A R Rees
Journal:  Protein Eng       Date:  1993-01

10.  Cloning and characterization of acetohydroxyacid synthase from Bacillus stearothermophilus.

Authors:  Iris Porat; Michael Vinogradov; Maria Vyazmensky; Chung-Dar Lu; David M Chipman; Ahmed T Abdelal; Ze'ev Barak
Journal:  J Bacteriol       Date:  2004-01       Impact factor: 3.490

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  4 in total

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Authors:  Jiang Yin; Grace Garen; Craig Garen; Michael N G James
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2011-07-20

2.  Molecular evolution of acetohydroxyacid synthase in bacteria.

Authors:  Yadi Liu; Yanyan Li; Xiaoyuan Wang
Journal:  Microbiologyopen       Date:  2017-08-06       Impact factor: 3.139

3.  Characterization of acetohydroxyacid synthase from the hyperthermophilic bacterium Thermotoga maritima.

Authors:  Mohammad S Eram; Benozir Sarafuddin; Frank Gong; Kesen Ma
Journal:  Biochem Biophys Rep       Date:  2015-08-28

4.  Preparation of a whole cell catalyst overexpressing acetohydroxyacid synthase of Thermotoga maritima and its application in the syntheses of α-hydroxyketones.

Authors:  Yan-Fei Liang; Le-Tian Yan; Qiao Yue; Ji-Kui Zhao; Cai-Yun Luo; Feng Gao; Heng Li; Wen-Yun Gao
Journal:  Sci Rep       Date:  2020-09-21       Impact factor: 4.379

  4 in total

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