Literature DB >> 11751050

The ACT domain family.

D M Chipman1, B Shaanan.   

Abstract

A novel ligand-binding domain, named the 'ACT domain', was recently identified by a PSI-BLAST search. The archetypical ACT domain is the C-terminal regulatory domain of 3-phosphoglycerate dehydrogenase (3PGDH), which folds with a ferredoxin-like betaalphabetabetaalphabeta topology. A pair of ACT domains form an eight-stranded antiparallel sheet with two molecules of the allosteric inhibitor serine bound in the interface. The ACT domain is found in a variety of contexts and is proposed to be a conserved regulatory ligand binding fold. Rat phenylalanine hydroxylase has a regulatory domain with a similar fold, but different ligand-binding mode. Putative ACT domains in some proteins of unknown structure (e.g. acetohydroxyacid synthase regulatory subunits) may also fold like the 3PGDH regulatory domain. The regulatory domain of threonine deaminase, although not a member of the ACT sequence family, is similar in structure to the paired 3PGDH regulatory domains. Repeats of ACT-like domains can create nonequivalent ligand-binding sites with the potential for complex regulatory patterns. The structures and mechanisms of such systems have only begun to be examined.

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Year:  2001        PMID: 11751050     DOI: 10.1016/s0959-440x(01)00272-x

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  83 in total

1.  Molecular characterization of a novel gene family encoding ACT domain repeat proteins in Arabidopsis.

Authors:  Ming-Hsiun Hsieh; Howard M Goodman
Journal:  Plant Physiol       Date:  2002-12       Impact factor: 8.340

2.  Solution structure of Vibrio cholerae protein VC0424: a variation of the ferredoxin-like fold.

Authors:  Theresa A Ramelot; Shuisong Ni; Sharon Goldsmith-Fischman; John R Cort; Barry Honig; Michael A Kennedy
Journal:  Protein Sci       Date:  2003-07       Impact factor: 6.725

3.  Mutagenesis and functional characterization of the four domains of GlnD, a bifunctional nitrogen sensor protein.

Authors:  Yaoping Zhang; Edward L Pohlmann; Jose Serate; Mary C Conrad; Gary P Roberts
Journal:  J Bacteriol       Date:  2010-04-02       Impact factor: 3.490

4.  Mechanism of concerted inhibition of alpha2beta2-type hetero-oligomeric aspartate kinase from Corynebacterium glutamicum.

Authors:  Ayako Yoshida; Takeo Tomita; Tomohisa Kuzuyama; Makoto Nishiyama
Journal:  J Biol Chem       Date:  2010-06-23       Impact factor: 5.157

5.  Aspartate-Derived Amino Acid Biosynthesis in Arabidopsis thaliana.

Authors:  Georg Jander; Vijay Joshi
Journal:  Arabidopsis Book       Date:  2009-06-10

6.  Regulation of tryptophan operon expression in the archaeon Methanothermobacter thermautotrophicus.

Authors:  Yunwei Xie; John N Reeve
Journal:  J Bacteriol       Date:  2005-09       Impact factor: 3.490

7.  Spontaneous trpY mutants and mutational analysis of the TrpY archaeal transcription regulator.

Authors:  L'ubomíra Cubonová; Kathleen Sandman; Elizabeth A Karr; Andrew J Cochran; John N Reeve
Journal:  J Bacteriol       Date:  2007-03-30       Impact factor: 3.490

8.  Crystal structures of TM0549 and NE1324--two orthologs of E. coli AHAS isozyme III small regulatory subunit.

Authors:  Janusz J Petkowski; Maksymilian Chruszcz; Matthew D Zimmerman; Heping Zheng; Tatiana Skarina; Olena Onopriyenko; Marcin T Cymborowski; Katarzyna D Koclega; Alexei Savchenko; Aled Edwards; Wladek Minor
Journal:  Protein Sci       Date:  2007-07       Impact factor: 6.725

9.  Novel stand-alone RAM domain protein-mediated catalytic control of anthranilate phosphoribosyltransferase in tryptophan biosynthesis in Thermus thermophilus.

Authors:  Tetsuo Kubota; Hajime Matsushita; Takeo Tomita; Saori Kosono; Minoru Yoshida; Tomohisa Kuzuyama; Makoto Nishiyama
Journal:  Extremophiles       Date:  2016-10-19       Impact factor: 2.395

10.  Mutational and structural analysis of L-N-carbamoylase reveals new insights into a peptidase M20/M25/M40 family member.

Authors:  Sergio Martínez-Rodríguez; Abel García-Pino; Francisco Javier Las Heras-Vázquez; Josefa María Clemente-Jiménez; Felipe Rodríguez-Vico; Juan M García-Ruiz; Remy Loris; Jose Antonio Gavira
Journal:  J Bacteriol       Date:  2012-08-17       Impact factor: 3.490

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