Literature DB >> 17554475

The Tol1 transposable element of the medaka fish moves in human and mouse cells.

Akihiko Koga1, Atsuko Shimada2, Toshiya Kuroki3, Hiroshi Hori3, Junko Kusumi4, Yoriko Kyono-Hamaguchi5, Satoshi Hamaguchi5.   

Abstract

DNA-based transposable elements can be used as tools for gene engineering and gene therapy. A great advantage over RNA-mediated elements and retroviruses is the simplicity and safety of usage. The Tol1 element of the medaka fish Oryzias latipes has structural features of DNA-based elements. Although its excision has already been demonstrated, de novo insertion has not been observed, and a transposase has not been hitherto identified. We first cloned, through in silico search alignments and genomic library screenings, a 4.4-kb Tol1 copy carrying open reading frames and then identified, by mRNA analysis, a 2.9-kb transcript coding for 851 amino acids. The protein product of this transcript catalyzed transposition of a nonautonomous Tol1 copy in human and mouse culture cells. This identification of a fully functional Tol1 transposase could lead to the development of new tools for basic and translational molecular biology applications in mammals.

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Year:  2007        PMID: 17554475     DOI: 10.1007/s10038-007-0161-2

Source DB:  PubMed          Journal:  J Hum Genet        ISSN: 1434-5161            Impact factor:   3.172


  22 in total

1.  Initial sequencing and analysis of the human genome.

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Journal:  Nature       Date:  2001-02-15       Impact factor: 49.962

2.  Gene transfer and cloning of flanking chromosomal regions using the medaka fish Tol2 transposable element.

Authors:  Akihiko Koga; Hiroshi Hori; Mitsuru Sakaizumi
Journal:  Mar Biotechnol (NY)       Date:  2002-01       Impact factor: 3.619

3.  Hemimethylation and non-CpG methylation levels in a promoter region of human LINE-1 (L1) repeated elements.

Authors:  Alice F Burden; Nathan C Manley; Aaron D Clark; Stanley M Gartler; Charles D Laird; R Scott Hansen
Journal:  J Biol Chem       Date:  2005-02-14       Impact factor: 5.157

4.  Color reversion of the albino medaka fish associated with spontaneous somatic excision of the Tol-1 transposable element from the tyrosinase gene.

Authors:  Makiko Tsutsumi; Shuichiro Imai; Yoriko Kyono-Hamaguchi; Satoshi Hamaguchi; Akihiko Koga; Hiroshi Hori
Journal:  Pigment Cell Res       Date:  2006-06

5.  piggyBac is a flexible and highly active transposon as compared to sleeping beauty, Tol2, and Mos1 in mammalian cells.

Authors:  Sareina Chiung-Yuan Wu; Yaa-Jyuhn James Meir; Craig J Coates; Alfred M Handler; Pawel Pelczar; Stefan Moisyadi; Joseph M Kaminski
Journal:  Proc Natl Acad Sci U S A       Date:  2006-09-27       Impact factor: 11.205

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Journal:  Nature       Date:  1996-09-05       Impact factor: 49.962

7.  Molecular reconstruction of Sleeping Beauty, a Tc1-like transposon from fish, and its transposition in human cells.

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Journal:  Cell       Date:  1997-11-14       Impact factor: 41.582

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Authors:  D L Hartl; E R Lozovskaya; D I Nurminsky; A R Lohe
Journal:  Trends Genet       Date:  1997-05       Impact factor: 11.639

9.  Vertebrate DNA transposon as a natural mutator: the medaka fish Tol2 element contributes to genetic variation without recognizable traces.

Authors:  Akihiko Koga; Atsuo Iida; Hiroshi Hori; Atsuko Shimada; Akihiro Shima
Journal:  Mol Biol Evol       Date:  2006-05-03       Impact factor: 16.240

10.  Frequency of recent retrotransposition events in the human factor IX gene.

Authors:  X Li; W A Scaringe; K A Hill; S Roberts; A Mengos; D Careri; M T Pinto; C K Kasper; S S Sommer
Journal:  Hum Mutat       Date:  2001-06       Impact factor: 4.878

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  11 in total

1.  Repetitive sequences originating from the centromere constitute large-scale heterochromatin in the telomere region in the siamang, a small ape.

Authors:  A Koga; Y Hirai; T Hara; H Hirai
Journal:  Heredity (Edinb)       Date:  2012-06-06       Impact factor: 3.821

Review 2.  Transposon tools hopping in vertebrates.

Authors:  Jun Ni; Karl J Clark; Scott C Fahrenkrug; Stephen C Ekker
Journal:  Brief Funct Genomic Proteomic       Date:  2008-11

Review 3.  From genes to function: the C. elegans genetic toolbox.

Authors:  Thomas Boulin; Oliver Hobert
Journal:  Wiley Interdiscip Rev Dev Biol       Date:  2011-11-28       Impact factor: 5.814

4.  General survey of hAT transposon superfamily with highlight on hobo element in Drosophila.

Authors:  Véronique Ladevèze; Nicole Chaminade; Françoise Lemeunier; Georges Periquet; Sylvie Aulard
Journal:  Genetica       Date:  2012-10-31       Impact factor: 1.082

5.  Recent transposition activity of Xenopus T2 family miniature inverted-repeat transposable elements.

Authors:  Akira Hikosaka; Kazuki Nishimura; Tomoe Hikosaka-Katayama; Akira Kawahara
Journal:  Mol Genet Genomics       Date:  2011-01-15       Impact factor: 3.291

6.  The Tol1 element of medaka fish is transposed with only terminal regions and can deliver large DNA fragments into the chromosomes.

Authors:  Akihiko Koga; Ichizo Higashide; Hiroshi Hori; Yuko Wakamatsu; Yoriko Kyono-Hamaguchi; Satoshi Hamaguchi
Journal:  J Hum Genet       Date:  2007-11-02       Impact factor: 3.172

7.  Complete fusion of a transposon and herpesvirus created the Teratorn mobile element in medaka fish.

Authors:  Yusuke Inoue; Tomonori Saga; Takumi Aikawa; Masahiko Kumagai; Atsuko Shimada; Yasushi Kawaguchi; Kiyoshi Naruse; Shinichi Morishita; Akihiko Koga; Hiroyuki Takeda
Journal:  Nat Commun       Date:  2017-09-15       Impact factor: 14.919

8.  Passport, a native Tc1 transposon from flatfish, is functionally active in vertebrate cells.

Authors:  Karl J Clark; Daniel F Carlson; Michael J Leaver; Linda K Foster; Scott C Fahrenkrug
Journal:  Nucleic Acids Res       Date:  2009-01-09       Impact factor: 16.971

9.  Two types of alpha satellite DNA in distinct chromosomal locations in Azara's owl monkey.

Authors:  Ornjira Prakhongcheep; Yuriko Hirai; Toru Hara; Kornsorn Srikulnath; Hirohisa Hirai; Akihiko Koga
Journal:  DNA Res       Date:  2013-03-10       Impact factor: 4.458

10.  Heterochromatin blocks constituting the entire short arms of acrocentric chromosomes of Azara's owl monkey: formation processes inferred from chromosomal locations.

Authors:  Ornjira Prakhongcheep; Nampech Chaiprasertsri; Shoko Terada; Yuriko Hirai; Kornsorn Srikulnath; Hirohisa Hirai; Akihiko Koga
Journal:  DNA Res       Date:  2013-06-11       Impact factor: 4.458

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