Literature DB >> 17517656

Polymerization kinetics of ADP- and ADP-Pi-actin determined by fluorescence microscopy.

Ikuko Fujiwara1, Dimitrios Vavylonis, Thomas D Pollard.   

Abstract

We used fluorescence microscopy to determine how polymerization of Mg-ADP-actin depends on the concentration of phosphate. From the dependence of the elongation rate on the actin concentration and direct observations of depolymerizing filaments, we measured the polymerization rate constants of ADP-actin and ADP-P(i)-actin. Saturating phosphate reduces the critical concentration for polymerization of Mg-ADP-actin from 1.8 to 0.06 microM almost entirely by reducing the dissociation rate constants at both ends. Saturating phosphate increases the barbed end association rate constant of Mg-ADP-actin 15%, but this value is still threefold less than that of ATP-actin. Thus, ATP hydrolysis without phosphate dissociation must change the conformation of polymerized actin. Analysis of depolymerization experiments in the presence of phosphate suggests that phosphate dissociation near the terminal subunits is much faster than in the interior. Remarkably, 10 times more phosphate is required to slow the depolymerization of the pointed end than the barbed end, suggesting a weak affinity of phosphate near the pointed end. Our observations of single actin filaments provide clues about the origins of the difference in the critical concentration at the two ends of actin filaments in the presence of ATP.

Entities:  

Mesh:

Substances:

Year:  2007        PMID: 17517656      PMCID: PMC1885587          DOI: 10.1073/pnas.0702510104

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  35 in total

1.  Tropomodulin increases the critical concentration of barbed end-capped actin filaments by converting ADP.P(i)-actin to ADP-actin at all pointed filament ends.

Authors:  A Weber; C R Pennise; V M Fowler
Journal:  J Biol Chem       Date:  1999-12-03       Impact factor: 5.157

2.  Hydrolysis of ATP by polymerized actin depends on the bound divalent cation but not profilin.

Authors:  Laurent Blanchoin; Thomas D Pollard
Journal:  Biochemistry       Date:  2002-01-15       Impact factor: 3.162

3.  Real-time measurements of actin filament polymerization by total internal reflection fluorescence microscopy.

Authors:  Jeffrey R Kuhn; Thomas D Pollard
Journal:  Biophys J       Date:  2004-11-19       Impact factor: 4.033

4.  Kinetics of the formation and dissociation of actin filament branches mediated by Arp2/3 complex.

Authors:  Rachel E Mahaffy; Thomas D Pollard
Journal:  Biophys J       Date:  2006-08-11       Impact factor: 4.033

5.  ATP hydrolysis stimulates large length fluctuations in single actin filaments.

Authors:  Evgeny B Stukalin; Anatoly B Kolomeisky
Journal:  Biophys J       Date:  2006-01-27       Impact factor: 4.033

6.  Crystal structures of expressed non-polymerizable monomeric actin in the ADP and ATP states.

Authors:  Mark A Rould; Qun Wan; Peteranne B Joel; Susan Lowey; Kathleen M Trybus
Journal:  J Biol Chem       Date:  2006-08-18       Impact factor: 5.157

7.  Inorganic phosphate regulates the binding of cofilin to actin filaments.

Authors:  Andras Muhlrad; Dmitry Pavlov; Y Michael Peyser; Emil Reisler
Journal:  FEBS J       Date:  2006-04       Impact factor: 5.542

8.  The Arp2/3 complex nucleates actin filament branches from the sides of pre-existing filaments.

Authors:  K J Amann; T D Pollard
Journal:  Nat Cell Biol       Date:  2001-03       Impact factor: 28.824

9.  Mechanism of interaction of Acanthamoeba actophorin (ADF/Cofilin) with actin filaments.

Authors:  L Blanchoin; T D Pollard
Journal:  J Biol Chem       Date:  1999-05-28       Impact factor: 5.157

10.  Microtubules remodel actomyosin networks in Xenopus egg extracts via two mechanisms of F-actin transport.

Authors:  C Waterman-Storer; D Y Duey; K L Weber; J Keech; R E Cheney; E D Salmon; W M Bement
Journal:  J Cell Biol       Date:  2000-07-24       Impact factor: 10.539

View more
  87 in total

1.  Direct visualization of secondary structures of F-actin by electron cryomicroscopy.

Authors:  Takashi Fujii; Atsuko H Iwane; Toshio Yanagida; Keiichi Namba
Journal:  Nature       Date:  2010-09-15       Impact factor: 49.962

2.  Role of ATP-hydrolysis in the dynamics of a single actin filament.

Authors:  Padinhateeri Ranjith; Kirone Mallick; Jean-François Joanny; David Lacoste
Journal:  Biophys J       Date:  2010-04-21       Impact factor: 4.033

3.  A nucleotide state-sensing region on actin.

Authors:  Dmitri S Kudryashov; Elena E Grintsevich; Peter A Rubenstein; Emil Reisler
Journal:  J Biol Chem       Date:  2010-06-08       Impact factor: 5.157

4.  Actin filament segmentation using spatiotemporal active-surface and active-contour models.

Authors:  Hongsheng Li; Tian Shen; Dimitrios Vavylonis; Xiaolei Huang
Journal:  Med Image Comput Comput Assist Interv       Date:  2010

5.  Insights into the influence of nucleotides on actin family proteins from seven structures of Arp2/3 complex.

Authors:  Brad J Nolen; Thomas D Pollard
Journal:  Mol Cell       Date:  2007-05-11       Impact factor: 17.970

6.  An open model of actin dendritic nucleation.

Authors:  Jonathon A Ditlev; Nathaniel M Vacanti; Igor L Novak; Leslie M Loew
Journal:  Biophys J       Date:  2009-05-06       Impact factor: 4.033

7.  Dynamic stabilization of actin filaments.

Authors:  Hao Yuan Kueh; William M Brieher; Timothy J Mitchison
Journal:  Proc Natl Acad Sci U S A       Date:  2008-10-17       Impact factor: 11.205

8.  Latrunculin A Accelerates Actin Filament Depolymerization in Addition to Sequestering Actin Monomers.

Authors:  Ikuko Fujiwara; Mark E Zweifel; Naomi Courtemanche; Thomas D Pollard
Journal:  Curr Biol       Date:  2018-09-27       Impact factor: 10.834

9.  Unusual dynamics of the divergent malaria parasite PfAct1 actin filament.

Authors:  Hailong Lu; Patricia M Fagnant; Kathleen M Trybus
Journal:  Proc Natl Acad Sci U S A       Date:  2019-09-23       Impact factor: 11.205

10.  Nucleotide-mediated conformational changes of monomeric actin and Arp3 studied by molecular dynamics simulations.

Authors:  Paul Dalhaimer; Thomas D Pollard; Brad J Nolen
Journal:  J Mol Biol       Date:  2007-11-28       Impact factor: 5.469

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.