Literature DB >> 20530485

A nucleotide state-sensing region on actin.

Dmitri S Kudryashov1, Elena E Grintsevich, Peter A Rubenstein, Emil Reisler.   

Abstract

The nucleotide state of actin (ATP, ADP-P(i), or ADP) is known to impact its interactions with other actin molecules upon polymerization as well as with multiple actin binding proteins both in the monomeric and filamentous states of actin. Recently, molecular dynamics simulations predicted that a sequence located at the interface of subdomains 1 and 3 (W-loop; residues 165-172) changes from an unstructured loop to a beta-turn conformation upon ATP hydrolysis (Zheng, X., Diraviyam, K., and Sept, D. (2007) Biophys. J. 93, 1277-1283). This region participates directly in the binding to other subunits in F-actin as well as to cofilin, profilin, and WH2 domain proteins and, therefore, could contribute to the nucleotide sensitivity of these interactions. The present study demonstrates a reciprocal communication between the W-loop region and the nucleotide binding cleft on actin. Point mutagenesis of residues 167, 169, and 170 and their site-specific labeling significantly affect the nucleotide release from the cleft region, whereas the ATP/ADP switch alters the fluorescence of probes located in the W-loop. In the ADP-P(i) state, the W-loop adopts a conformation similar to that in the ATP state but different from the ADP state. Binding of latrunculin A to the nucleotide cleft favors the ATP-like conformation of the W-loop, whereas ADP-ribosylation of Arg-177 forces the W-loop into a conformation distinct from those in the ADP and ATP-states. Overall, our experimental data suggest that the W-loop of actin is a nucleotide sensor, which may contribute to the nucleotide state-dependent changes in F-actin and nucleotide state-modulated interactions of both G- and F-actin with actin-binding proteins.

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Year:  2010        PMID: 20530485      PMCID: PMC2919123          DOI: 10.1074/jbc.M110.123869

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  64 in total

1.  The role of the bound nucleotide in the polymerization of actin.

Authors:  R Cooke
Journal:  Biochemistry       Date:  1975-07-15       Impact factor: 3.162

2.  Binding of phosphate to F-ADP-actin and role of F-ADP-Pi-actin in ATP-actin polymerization.

Authors:  M F Carlier; D Pantaloni
Journal:  J Biol Chem       Date:  1988-01-15       Impact factor: 5.157

3.  Inhibition of actin polymerization by latrunculin A.

Authors:  M Coué; S L Brenner; I Spector; E D Korn
Journal:  FEBS Lett       Date:  1987-03-23       Impact factor: 4.124

4.  Measurement of Pi dissociation from actin filaments following ATP hydrolysis using a linked enzyme assay.

Authors:  M F Carlier
Journal:  Biochem Biophys Res Commun       Date:  1987-03-30       Impact factor: 3.575

5.  Preparation and polymerization of skeletal muscle ADP-actin.

Authors:  A A Lal; S L Brenner; E D Korn
Journal:  J Biol Chem       Date:  1984-11-10       Impact factor: 5.157

6.  A simple method for displaying the hydropathic character of a protein.

Authors:  J Kyte; R F Doolittle
Journal:  J Mol Biol       Date:  1982-05-05       Impact factor: 5.469

7.  ADP-ribosylation of actin causes increase in the rate of ATP exchange and inhibition of ATP hydrolysis.

Authors:  U Geipel; I Just; B Schering; D Haas; K Aktories
Journal:  Eur J Biochem       Date:  1989-01-15

8.  The effects of ADF/cofilin and profilin on the conformation of the ATP-binding cleft of monomeric actin.

Authors:  Roland Kardos; Kinga Pozsonyi; Elisa Nevalainen; Pekka Lappalainen; Miklós Nyitrai; Gábor Hild
Journal:  Biophys J       Date:  2009-03-18       Impact factor: 4.033

9.  Actin polymerization and ATP hydrolysis.

Authors:  E D Korn; M F Carlier; D Pantaloni
Journal:  Science       Date:  1987-10-30       Impact factor: 47.728

10.  Trisoxazole macrolide toxins mimic the binding of actin-capping proteins to actin.

Authors:  Vadim A Klenchin; John S Allingham; Ryan King; Junichi Tanaka; Gerard Marriott; Ivan Rayment
Journal:  Nat Struct Biol       Date:  2003-10-26
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  16 in total

1.  Mutant profilin suppresses mutant actin-dependent mitochondrial phenotype in Saccharomyces cerevisiae.

Authors:  Kuo-Kuang Wen; Melissa McKane; Ema Stokasimov; Peter A Rubenstein
Journal:  J Biol Chem       Date:  2011-09-28       Impact factor: 5.157

2.  Functional characterization of the human α-cardiac actin mutations Y166C and M305L involved in hypertrophic cardiomyopathy.

Authors:  Mirco Müller; Antonina Joanna Mazur; Elmar Behrmann; Ralph P Diensthuber; Michael B Radke; Zheng Qu; Christoph Littwitz; Stefan Raunser; Cora-Ann Schoenenberger; Dietmar J Manstein; Hans Georg Mannherz
Journal:  Cell Mol Life Sci       Date:  2012-05-29       Impact factor: 9.261

3.  Structural basis for profilin-mediated actin nucleotide exchange.

Authors:  Jason C Porta; Gloria E O Borgstahl
Journal:  J Mol Biol       Date:  2012-02-22       Impact factor: 5.469

4.  Myosin binding surface on actin probed by hydroxyl radical footprinting and site-directed labels.

Authors:  Zeynep A Oztug Durer; J K Amisha Kamal; Sabrina Benchaar; Mark R Chance; Emil Reisler
Journal:  J Mol Biol       Date:  2011-10-01       Impact factor: 5.469

5.  The W-loop of alpha-cardiac actin is critical for heart function and endocardial cushion morphogenesis in zebrafish.

Authors:  Nicole O Glenn; Melissa McKane; Vikram Kohli; Kuo-Kuang Wen; Peter A Rubenstein; Thomas Bartman; Saulius Sumanas
Journal:  Mol Cell Biol       Date:  2012-07-02       Impact factor: 4.272

6.  ATP and ADP actin states.

Authors:  Dmitri S Kudryashov; Emil Reisler
Journal:  Biopolymers       Date:  2013-04       Impact factor: 2.505

7.  Rapid nucleotide exchange renders Asp-11 mutant actins resistant to depolymerizing activity of cofilin, leading to dominant toxicity in vivo.

Authors:  Nobuhisa Umeki; Jun Nakajima; Taro Q P Noguchi; Kiyotaka Tokuraku; Akira Nagasaki; Kohji Ito; Keiko Hirose; Taro Q P Uyeda
Journal:  J Biol Chem       Date:  2012-12-03       Impact factor: 5.157

8.  ACTIN-DIRECTED TOXIN. ACD toxin-produced actin oligomers poison formin-controlled actin polymerization.

Authors:  David B Heisler; Elena Kudryashova; Dmitry O Grinevich; Cristian Suarez; Jonathan D Winkelman; Konstantin G Birukov; Sainath R Kotha; Narasimham L Parinandi; Dimitrios Vavylonis; David R Kovar; Dmitri S Kudryashov
Journal:  Science       Date:  2015-07-31       Impact factor: 47.728

Review 9.  Controlling the cortical actin motor.

Authors:  Julie Grantham; Ingrid Lassing; Roger Karlsson
Journal:  Protoplasma       Date:  2012-04-15       Impact factor: 3.356

10.  Subdomain location of mutations in cardiac actin correlate with type of functional change.

Authors:  Maureen M Mundia; Ryan W Demers; Melissa L Chow; Alexandru A Perieteanu; John F Dawson
Journal:  PLoS One       Date:  2012-05-08       Impact factor: 3.240

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