Literature DB >> 17508126

Reconsideration of an early dogma, saying "there is no evidence for disulfide bonds in proteins from archaea".

Rudolf Ladenstein1, Bin Ren.   

Abstract

Stability and function of a large number of proteins are crucially dependent on the presence of disulfide bonds. Recent genome analysis has pointed out an important role of disulfide bonds for the structural stabilization of intracellular proteins from hyperthermophilic archaea and bacteria. These findings contradict the conventional view that disulfide bonds are rare in those proteins. A specific protein, known as protein disulfide oxidoreductase (PDO) is recognized as a potential key enzyme in intracellular disulfide-shuffling in hyperthermophiles. The structure of this protein consists of two combined thioredoxin-related units which together, in tandem-like manner, form a closed protein domain. Each of these units contains a distinct CXXC active site motif. Both sites seem to have different redox properties. A relation to eukaryotic protein disulfide isomerase is suggested by the observed structural and functional characteristics of the protein. Enzymological studies have revealed that both, the archaeal and bacterial forms of this protein show oxidative and reductive activity and are able to isomerize protein disulfides. The variety of active site disulfides found in PDO's from hyperthermophiles is puzzling. It is assumed, that PDO enzymes in hyperthermophilic archaea and bacteria may be part of a complex system involved in the maintenance of protein disulfide bonds.

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Year:  2007        PMID: 17508126     DOI: 10.1007/s00792-007-0076-z

Source DB:  PubMed          Journal:  Extremophiles        ISSN: 1431-0651            Impact factor:   2.395


  52 in total

1.  Mimicking the active site of protein disulfide-isomerase by substitution of proline 34 in Escherichia coli thioredoxin.

Authors:  G Krause; J Lundström; J L Barea; C Pueyo de la Cuesta; A Holmgren
Journal:  J Biol Chem       Date:  1991-05-25       Impact factor: 5.157

2.  The crystal structure of yeast protein disulfide isomerase suggests cooperativity between its active sites.

Authors:  Geng Tian; Song Xiang; Robert Noiva; William J Lennarz; Hermann Schindelin
Journal:  Cell       Date:  2006-01-13       Impact factor: 41.582

3.  The crystallographically determined structures of atypical strained disulfides engineered into subtilisin.

Authors:  B A Katz; A Kossiakoff
Journal:  J Biol Chem       Date:  1986-11-25       Impact factor: 5.157

4.  A protein disulfide oxidoreductase from the archaeon Pyrococcus furiosus contains two thioredoxin fold units.

Authors:  B Ren; G Tibbelin; D de Pascale; M Rossi; S Bartolucci; R Ladenstein
Journal:  Nat Struct Biol       Date:  1998-07

5.  The role of the thioredoxin and glutaredoxin pathways in reducing protein disulfide bonds in the Escherichia coli cytoplasm.

Authors:  W A Prinz; F Aslund; A Holmgren; J Beckwith
Journal:  J Biol Chem       Date:  1997-06-20       Impact factor: 5.157

6.  The crystal structure of adenylosuccinate lyase from Pyrobaculum aerophilum reveals an intracellular protein with three disulfide bonds.

Authors:  E A Toth; C Worby; J E Dixon; E R Goedken; S Marqusee; T O Yeates
Journal:  J Mol Biol       Date:  2000-08-11       Impact factor: 5.469

7.  Isocitrate dehydrogenase from the hyperthermophile Aeropyrum pernix: X-ray structure analysis of a ternary enzyme-substrate complex and thermal stability.

Authors:  Mikael Karlström; Runar Stokke; Ida Helene Steen; Nils-Kåre Birkeland; Rudolf Ladenstein
Journal:  J Mol Biol       Date:  2005-01-21       Impact factor: 5.469

8.  Identification of a protein required for disulfide bond formation in vivo.

Authors:  J C Bardwell; K McGovern; J Beckwith
Journal:  Cell       Date:  1991-11-01       Impact factor: 41.582

9.  The genomics of disulfide bonding and protein stabilization in thermophiles.

Authors:  Morgan Beeby; Brian D O'Connor; Carsten Ryttersgaard; Daniel R Boutz; L Jeanne Perry; Todd O Yeates
Journal:  PLoS Biol       Date:  2005-08-23       Impact factor: 8.029

10.  Escherichia coli alkaline phosphatase fails to acquire disulfide bonds when retained in the cytoplasm.

Authors:  A I Derman; J Beckwith
Journal:  J Bacteriol       Date:  1991-12       Impact factor: 3.490

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  15 in total

1.  Intramolecular disulfide bond between catalytic cysteines in an intein precursor.

Authors:  Wen Chen; Lingyun Li; Zhenming Du; Jiajing Liu; Julie N Reitter; Kenneth V Mills; Robert J Linhardt; Chunyu Wang
Journal:  J Am Chem Soc       Date:  2012-01-27       Impact factor: 15.419

2.  Structures and functional implications of an AMP-binding cystathionine beta-synthase domain protein from a hyperthermophilic archaeon.

Authors:  Neil P King; Toni M Lee; Michael R Sawaya; Duilio Cascio; Todd O Yeates
Journal:  J Mol Biol       Date:  2008-05-07       Impact factor: 5.469

3.  Ferredoxin:thioredoxin reductase (FTR) links the regulation of oxygenic photosynthesis to deeply rooted bacteria.

Authors:  Monica Balsera; Estefania Uberegui; Dwi Susanti; Ruth A Schmitz; Biswarup Mukhopadhyay; Peter Schürmann; Bob B Buchanan
Journal:  Planta       Date:  2012-12-06       Impact factor: 4.116

4.  Role of loops connecting secondary structure elements in the stabilization of proteins isolated from thermophilic organisms.

Authors:  Nicole Balasco; Luciana Esposito; Alfonso De Simone; Luigi Vitagliano
Journal:  Protein Sci       Date:  2013-07       Impact factor: 6.725

5.  Functional and structural characterization of protein disulfide oxidoreductase from Thermus thermophilus HB27.

Authors:  Emilia Pedone; Gabriella Fiorentino; Luciano Pirone; Patrizia Contursi; Simonetta Bartolucci; Danila Limauro
Journal:  Extremophiles       Date:  2014-05-18       Impact factor: 2.395

6.  Characterization of a thioredoxin-thioredoxin reductase system from the hyperthermophilic bacterium Thermotoga maritima.

Authors:  Xianqin Yang; Kesen Ma
Journal:  J Bacteriol       Date:  2010-01-08       Impact factor: 3.490

7.  The role of disulfide bond in hyperthermophilic endocellulase.

Authors:  Han-Woo Kim; Kazuhiko Ishikawa
Journal:  Extremophiles       Date:  2013-04-27       Impact factor: 2.395

8.  Widespread disulfide bonding in proteins from thermophilic archaea.

Authors:  Julien Jorda; Todd O Yeates
Journal:  Archaea       Date:  2011-09-20       Impact factor: 3.273

9.  SORGOdb: Superoxide Reductase Gene Ontology curated DataBase.

Authors:  Céline Lucchetti-Miganeh; David Goudenège; David Thybert; Gilles Salbert; Frédérique Barloy-Hubler
Journal:  BMC Microbiol       Date:  2011-05-16       Impact factor: 3.605

10.  Analysis on conservation of disulphide bonds and their structural features in homologous protein domain families.

Authors:  Ratna R Thangudu; Malini Manoharan; N Srinivasan; Frédéric Cadet; R Sowdhamini; Bernard Offmann
Journal:  BMC Struct Biol       Date:  2008-12-26
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