Literature DB >> 3096989

The crystallographically determined structures of atypical strained disulfides engineered into subtilisin.

B A Katz, A Kossiakoff.   

Abstract

The geometries of two disulfide bridges genetically engineered into subtilisin have been characterized by x-ray crystallography to determine the structural and energetic constraints involved in introducing disulfide bonds into proteins. Both disulfide bridges (Cys-24-Cys-87 and Cys-22-Cys-87) exhibit atypical sets of dihedral angles compared to those for other reported disulfide structures in proteins. The geometric trends for naturally occurring disulfides in protein crystal structures are examined. Comparison of the disulfide-containing mutant protein structures with the wild-type structure shows that, in both cases, disulfide incorporation is accommodated by relatively minor changes in local main-chain conformation. The Cys-22-Cys-87 disulfide has two high energy dihedral angles (X2 = 121 degrees, X2' = 143 degrees). Both disulfides produce short non-bonded contacts with the main-chain.

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Year:  1986        PMID: 3096989

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  46 in total

1.  The effects of disulfide bonds on the denatured state of barnase.

Authors:  J Clarke; A M Hounslow; C J Bond; A R Fersht; V Daggett
Journal:  Protein Sci       Date:  2000-12       Impact factor: 6.725

2.  A single disulfide bond restores thermodynamic and proteolytic stability to an extensively mutated protein.

Authors:  K R Roesler; A G Rao
Journal:  Protein Sci       Date:  2000-09       Impact factor: 6.725

3.  Trapping a 96 degrees domain rotation in two distinct conformations by engineered disulfide bridges.

Authors:  Robert Schultz-Heienbrok; Timm Maier; Norbert Sträter
Journal:  Protein Sci       Date:  2004-07       Impact factor: 6.725

4.  A Suite of Engineered GFP Molecules for Oligomeric Scaffolding.

Authors:  David J Leibly; Mark A Arbing; Inna Pashkov; Natasha DeVore; Geoffrey S Waldo; Thomas C Terwilliger; Todd O Yeates
Journal:  Structure       Date:  2015-08-13       Impact factor: 5.006

5.  Re-engineering redox-sensitive green fluorescent protein for improved response rate.

Authors:  Mark B Cannon; S James Remington
Journal:  Protein Sci       Date:  2005-12-01       Impact factor: 6.725

6.  Effect of Na+ binding on the conformation, stability and molecular recognition properties of thrombin.

Authors:  Vincenzo De Filippis; Elisa De Dea; Filippo Lucatello; Roberta Frasson
Journal:  Biochem J       Date:  2005-09-01       Impact factor: 3.857

7.  Contour length and refolding rate of a small protein controlled by engineered disulfide bonds.

Authors:  Sri Rama Koti Ainavarapu; Jasna Brujic; Hector H Huang; Arun P Wiita; Hui Lu; Lewyn Li; Kirstin A Walther; Mariano Carrion-Vazquez; Hongbin Li; Julio M Fernandez
Journal:  Biophys J       Date:  2006-10-06       Impact factor: 4.033

8.  Structure of a stabilizing disulfide bridge mutant that closes the active-site cleft of T4 lysozyme.

Authors:  R H Jacobson; M Matsumura; H R Faber; B W Matthews
Journal:  Protein Sci       Date:  1992-01       Impact factor: 6.725

9.  The cysteine-rich region of type VII collagen is a cystine knot with a new topology.

Authors:  Henrik Wegener; Hauke Paulsen; Karsten Seeger
Journal:  J Biol Chem       Date:  2014-01-02       Impact factor: 5.157

10.  The crystal structure of a trypsin-like mutant chymotrypsin: the role of position 226 in the activity and specificity of S189D chymotrypsin.

Authors:  Balázs Jelinek; Gergely Katona; Krisztián Fodor; István Venekei; László Gráf
Journal:  Protein J       Date:  2008-02       Impact factor: 2.371

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