Literature DB >> 17487551

Generation and relaxation of high rank coherences in AX3 systems in a selectively methionine labelled SH2 domain.

Karin Kloiber1, Michael Fischer, Karin Ledolter, Michael Nagl, Walther Schmid, Robert Konrat.   

Abstract

The usefulness of selective isotope labelling patterns is demonstrated using the C-terminal SH2 domain of PLC-gamma1 selectively 13C labelled at methionine methyl groups. We demonstrate the generation and relaxation of coherences that are second rank in protons and first rank in carbons that derive from quadrupolar order in protons. The decay rates of second rank double quantum proton coherences are measured. These terms exhibit fewer channels for cross-correlated relaxation compared to single quantum coherences. Our results indicate the potential application of the measurement of high order proton coherences to the analysis of dynamics in methyl-bearing side chains.

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Year:  2007        PMID: 17487551     DOI: 10.1007/s10858-007-9153-y

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  12 in total

1.  Synthesis of a 13C-methyl-group-labeled methionine precursor as a useful tool for simplifying protein structural analysis by NMR spectroscopy.

Authors:  Michael Fischer; Karin Kloiber; Johannes Häusler; Karin Ledolter; Robert Konrat; Walther Schmid
Journal:  Chembiochem       Date:  2007-04-16       Impact factor: 3.164

2.  Relaxation rates of degenerate 1H transitions in methyl groups of proteins as reporters of side-chain dynamics.

Authors:  Vitali Tugarinov; Lewis E Kay
Journal:  J Am Chem Soc       Date:  2006-06-07       Impact factor: 15.419

3.  Deuterium spin probes of side-chain dynamics in proteins. 1. Measurement of five relaxation rates per deuteron in (13)C-labeled and fractionally (2)H-enriched proteins in solution.

Authors:  Oscar Millet; D R Muhandiram; Nikolai R Skrynnikov; Lewis E Kay
Journal:  J Am Chem Soc       Date:  2002-06-05       Impact factor: 15.419

4.  NMRPipe: a multidimensional spectral processing system based on UNIX pipes.

Authors:  F Delaglio; S Grzesiek; G W Vuister; G Zhu; J Pfeifer; A Bax
Journal:  J Biomol NMR       Date:  1995-11       Impact factor: 2.835

5.  Probing slow time scale dynamics at methyl-containing side chains in proteins by relaxation dispersion NMR measurements: application to methionine residues in a cavity mutant of T4 lysozyme.

Authors:  N R Skrynnikov; F A Mulder; B Hon; F W Dahlquist; L E Kay
Journal:  J Am Chem Soc       Date:  2001-05-16       Impact factor: 15.419

6.  Attenuated T2 relaxation by mutual cancellation of dipole-dipole coupling and chemical shift anisotropy indicates an avenue to NMR structures of very large biological macromolecules in solution.

Authors:  K Pervushin; R Riek; G Wider; K Wüthrich
Journal:  Proc Natl Acad Sci U S A       Date:  1997-11-11       Impact factor: 11.205

7.  Simplification of protein NOESY spectra using bioorganic precursor synthesis and NMR spectral editing.

Authors:  Roman Lichtenecker; Martin L Ludwiczek; Walther Schmid; Robert Konrat
Journal:  J Am Chem Soc       Date:  2004-05-05       Impact factor: 15.419

8.  Correlation between dynamics and high affinity binding in an SH2 domain interaction.

Authors:  L E Kay; D R Muhandiram; N A Farrow; Y Aubin; J D Forman-Kay
Journal:  Biochemistry       Date:  1996-01-16       Impact factor: 3.162

9.  Carbonyl carbon transverse relaxation dispersion measurements and ms-micros timescale motion in a protein hydrogen bond network.

Authors:  Rieko Ishima; James Baber; John M Louis; Dennis A Torchia
Journal:  J Biomol NMR       Date:  2004-06       Impact factor: 2.835

10.  Cross-correlated relaxation enhanced 1H[bond]13C NMR spectroscopy of methyl groups in very high molecular weight proteins and protein complexes.

Authors:  Vitali Tugarinov; Peter M Hwang; Jason E Ollerenshaw; Lewis E Kay
Journal:  J Am Chem Soc       Date:  2003-08-27       Impact factor: 15.419

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  2 in total

1.  Conformational dependence of 13C shielding and coupling constants for methionine methyl groups.

Authors:  Glenn L Butterfoss; Eugene F DeRose; Scott A Gabel; Lalith Perera; Joseph M Krahn; Geoffrey A Mueller; Xunhai Zheng; Robert E London
Journal:  J Biomol NMR       Date:  2010-08-24       Impact factor: 2.835

2.  Protein-mediated antagonism between HIV reverse transcriptase ligands nevirapine and MgATP.

Authors:  Xunhai Zheng; Geoffrey A Mueller; Eugene F DeRose; Robert E London
Journal:  Biophys J       Date:  2013-06-18       Impact factor: 4.033

  2 in total

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