Literature DB >> 17464882

Geological dates and molecular rates: rapid divergence of rivers and their biotas.

Jonathan M Waters1, Diane L Rowe, Smita Apte, Tania M King, Graham P Wallis, Leigh Anderson, Richard J Norris, Dave Craw, Christopher P Burridge.   

Abstract

We highlight a novel molecular clock calibration system based on geologically dated river reversal and river capture events. Changes in drainage pattern may effect vicariant isolation of freshwater taxa, and thus provide a predictive framework for associated phylogeographic study. As a case in point, New Zealand's Pelorus and Kaituna rivers became geologically isolated from the larger Wairau River system 70 to 130 kyr BP. We conducted mitochondrial DNA phylogeographic analyses of two unrelated freshwater-limited fish taxa native to these river systems (Gobiomorphus breviceps, n = 63; Galaxias divergens, n = 95). Phylogenetic analysis of combined control region and cytochrome b sequences yielded reciprocally monophyletic clades of Pelorus-Kaituna and Wairau haplotypes for each species. Calibrated rates of molecular change based on this freshwater vicariant event are substantially faster than traditionally accepted rates for fishes but consistent with other recent inferences based on geologically young calibration points. A survey of freshwater phylogeographic literature reveals numerous examples in which the ages of recent evolutionary events may have been substantially overestimated through the use of "accepted" calibrations. We recommend that--wherever possible--biologists should start to reassess the conclusions of such studies by using more appropriate molecular calibrations derived from recent geological events.

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Year:  2007        PMID: 17464882     DOI: 10.1080/10635150701313855

Source DB:  PubMed          Journal:  Syst Biol        ISSN: 1063-5157            Impact factor:   15.683


  11 in total

Review 1.  Biogeographic calibrations for the molecular clock.

Authors:  Simon Y W Ho; K Jun Tong; Charles S P Foster; Andrew M Ritchie; Nathan Lo; Michael D Crisp
Journal:  Biol Lett       Date:  2015-09       Impact factor: 3.703

2.  Quantitative prediction of molecular clock and ka/ks at short timescales.

Authors:  Grant I Peterson; Joanna Masel
Journal:  Mol Biol Evol       Date:  2009-08-06       Impact factor: 16.240

3.  Landslide-dammed paleolake perturbs marine sedimentation and drives genetic change in anadromous fish.

Authors:  Benjamin H Mackey; Joshua J Roering; Michael P Lamb
Journal:  Proc Natl Acad Sci U S A       Date:  2011-11-14       Impact factor: 11.205

4.  Surviving historical Patagonian landscapes and climate: molecular insights from Galaxias maculatus.

Authors:  Tyler S Zemlak; Evelyn M Habit; Sandra J Walde; Cecilia Carrea; Daniel E Ruzzante
Journal:  BMC Evol Biol       Date:  2010-03-08       Impact factor: 3.260

5.  Beyond fossil calibrations: realities of molecular clock practices in evolutionary biology.

Authors:  Christy A Hipsley; Johannes Müller
Journal:  Front Genet       Date:  2014-05-26       Impact factor: 4.599

6.  A remarkable diversity of bone-eating worms (Osedax; Siboglinidae; Annelida).

Authors:  Robert C Vrijenhoek; Shannon B Johnson; Greg W Rouse
Journal:  BMC Biol       Date:  2009-11-10       Impact factor: 7.431

7.  Phylogeographic Diversity of the Lower Central American Cichlid Andinoacara coeruleopunctatus (Cichlidae).

Authors:  S Shawn McCafferty; Andrew Martin; Eldredge Bermingham
Journal:  Int J Evol Biol       Date:  2012-09-12

8.  Molecular phylogeography and evolutionary history of Poropuntius huangchuchieni (Cyprinidae) in Southwest China.

Authors:  Xiaoyun Wu; Jing Luo; Song Huang; Ziming Chen; Heng Xiao; Yaping Zhang
Journal:  PLoS One       Date:  2013-11-25       Impact factor: 3.240

9.  The past and present of an estuarine-resident fish, the "four-eyed fish" Anableps anableps (Cyprinodontiformes, Anablepidae), revealed by mtDNA sequences.

Authors:  Luciana Almeida Watanabe; Marcelo Vallinoto; Nils Asp Neto; Janice Muriel-Cunha; Ulrich Saint-Paul; Horacio Schneider; Iracilda Sampaio
Journal:  PLoS One       Date:  2014-07-08       Impact factor: 3.240

10.  A phylogeny for the pomatiopsidae (Gastropoda: Rissooidea): a resource for taxonomic, parasitological and biodiversity studies.

Authors:  Liang Liu; Guan-Nan Huo; Hong-Bin He; Benjiang Zhou; Stephen W Attwood
Journal:  BMC Evol Biol       Date:  2014-02-18       Impact factor: 3.260

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