Literature DB >> 17462961

Development, implementation, and a cognitive evaluation of a definitional question answering system for physicians.

Hong Yu1, Minsuk Lee, David Kaufman, John Ely, Jerome A Osheroff, George Hripcsak, James Cimino.   

Abstract

The published medical literature and online medical resources are important sources to help physicians make patient treatment decisions. Traditional sources used for information retrieval (e.g., PubMed) often return a list of documents in response to a user's query. Frequently the number of returned documents from large knowledge repositories is large and makes information seeking practical only "after hours" and not in the clinical setting. This study developed novel algorithms, and designed, implemented, and evaluated a medical definitional question answering system (MedQA). MedQA automatically analyzed a large number of electronic documents to generate short and coherent answers in response to definitional questions (i.e., questions with the format of "What is X?"). Our preliminary cognitive evaluation shows that MedQA out-performed three other online information systems (Google, OneLook, and PubMed) in two important efficiency criteria; namely, time spent and number of actions taken for a physician to identify a definition. It is our contention that question answering systems that aggregate pertinent information scattered across different documents have the potential to address clinical information needs within a timeframe necessary to meet the demands of clinicians.

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Year:  2007        PMID: 17462961     DOI: 10.1016/j.jbi.2007.03.002

Source DB:  PubMed          Journal:  J Biomed Inform        ISSN: 1532-0464            Impact factor:   6.317


  25 in total

1.  The MiPACQ clinical question answering system.

Authors:  Brian L Cairns; Rodney D Nielsen; James J Masanz; James H Martin; Martha S Palmer; Wayne H Ward; Guergana K Savova
Journal:  AMIA Annu Symp Proc       Date:  2011-10-22

2.  Combining relevance assignment with quality of the evidence to support guideline development.

Authors:  Marcelo Fiszman; Bruce E Bray; Dongwook Shin; Halil Kilicoglu; Glen C Bennett; Olivier Bodenreider; Thomas C Rindflesch
Journal:  Stud Health Technol Inform       Date:  2010

3.  Unsupervised method for extracting machine understandable medical knowledge from a large free text collection.

Authors:  Rong Xu; Amar K Das; Alan M Garber
Journal:  AMIA Annu Symp Proc       Date:  2009-11-14

4.  Biomedical negation scope detection with conditional random fields.

Authors:  Shashank Agarwal; Hong Yu
Journal:  J Am Med Inform Assoc       Date:  2010 Nov-Dec       Impact factor: 4.497

Review 5.  Frontiers of biomedical text mining: current progress.

Authors:  Pierre Zweigenbaum; Dina Demner-Fushman; Hong Yu; Kevin B Cohen
Journal:  Brief Bioinform       Date:  2007-10-30       Impact factor: 11.622

6.  Voice capture of medical residents' clinical information needs during an inpatient rotation.

Authors:  Herbert S Chase; David R Kaufman; Stephen B Johnson; Eneida A Mendonca
Journal:  J Am Med Inform Assoc       Date:  2009-03-04       Impact factor: 4.497

7.  Semantic processing to support clinical guideline development.

Authors:  Marcelo Fiszman; Eduardo Ortiz; Bruce E Bray; Thomas C Rindflesch
Journal:  AMIA Annu Symp Proc       Date:  2008-11-06

8.  Automatically extracting information needs from Ad Hoc clinical questions.

Authors:  Hong Yu; Yong-Gang Cao
Journal:  AMIA Annu Symp Proc       Date:  2008-11-06

9.  Automatically classifying sentences in full-text biomedical articles into Introduction, Methods, Results and Discussion.

Authors:  Shashank Agarwal; Hong Yu
Journal:  Bioinformatics       Date:  2009-09-25       Impact factor: 6.937

10.  Using the weighted keyword model to improve information retrieval for answering biomedical questions.

Authors:  Hong Yu; Yong-Gang Cao
Journal:  Summit Transl Bioinform       Date:  2009-03-01
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