Literature DB >> 18999100

Automatically extracting information needs from Ad Hoc clinical questions.

Hong Yu1, Yong-Gang Cao.   

Abstract

Automatically extracting information needs from ad hoc clinical questions is an important step towards medical question answering. In this work, we first explored supervised machine-learning approaches to automatically classify an ad hoc clinical question into general topics. We then evaluated different methods for automatically extracting keywords from an ad hoc clinical question. Our methods were evaluated on the 4,654 clinical questions maintained by the National Library of Medicine. Our best systems or methods showed F-score of 76% for the task of question-topic classification and an average F-score of 56% for extracting keywords from ad hoc clinical questions.

Mesh:

Year:  2008        PMID: 18999100      PMCID: PMC2655957     

Source DB:  PubMed          Journal:  AMIA Annu Symp Proc        ISSN: 1559-4076


  12 in total

1.  A taxonomy of generic clinical questions: classification study.

Authors:  J W Ely; J A Osheroff; P N Gorman; M H Ebell; M L Chambliss; E A Pifer; P Z Stavri
Journal:  BMJ       Date:  2000-08-12

2.  Scenario-based assessment of physicians' information needs.

Authors:  Yoon-Ho Seol; David R Kaufman; Eneida A Mendonça; James J Cimino; Stephen B Johnson
Journal:  Stud Health Technol Inform       Date:  2004

3.  Answering physicians' clinical questions: obstacles and potential solutions.

Authors:  John W Ely; Jerome A Osheroff; M Lee Chambliss; Mark H Ebell; Marcy E Rosenbaum
Journal:  J Am Med Inform Assoc       Date:  2004-11-23       Impact factor: 4.497

4.  Evaluation of PICO as a knowledge representation for clinical questions.

Authors:  Xiaoli Huang; Jimmy Lin; Dina Demner-Fushman
Journal:  AMIA Annu Symp Proc       Date:  2006

5.  Development, implementation, and a cognitive evaluation of a definitional question answering system for physicians.

Authors:  Hong Yu; Minsuk Lee; David Kaufman; John Ely; Jerome A Osheroff; George Hripcsak; James Cimino
Journal:  J Biomed Inform       Date:  2007-03-12       Impact factor: 6.317

6.  Obstacles to answering doctors' questions about patient care with evidence: qualitative study.

Authors:  John W Ely; Jerome A Osheroff; Mark H Ebell; M Lee Chambliss; Daniel C Vinson; James J Stevermer; Eric A Pifer
Journal:  BMJ       Date:  2002-03-23

7.  Lifelong self-directed learning using a computer database of clinical questions.

Authors:  J W Ely; J A Osheroff; K J Ferguson; M L Chambliss; D C Vinson; J L Moore
Journal:  J Fam Pract       Date:  1997-11       Impact factor: 0.493

8.  Generic queries for meeting clinical information needs.

Authors:  J J Cimino; A Aguirre; S B Johnson; P Peng
Journal:  Bull Med Libr Assoc       Date:  1993-04

9.  Analysis of questions asked by family doctors regarding patient care.

Authors:  J W Ely; J A Osheroff; M H Ebell; G R Bergus; B T Levy; M L Chambliss; E R Evans
Journal:  BMJ       Date:  1999-08-07

10.  An evaluation of information-seeking behaviors of general pediatricians.

Authors:  Donna M D'Alessandro; Clarence D Kreiter; Michael W Peterson
Journal:  Pediatrics       Date:  2004-01       Impact factor: 7.124

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  16 in total

1.  An investigation into the feasibility of spoken clinical question answering.

Authors:  Tim Miller; Kourosh Ravvaz; James J Cimino; Hong Yu
Journal:  AMIA Annu Symp Proc       Date:  2011-10-22

2.  The MiPACQ clinical question answering system.

Authors:  Brian L Cairns; Rodney D Nielsen; James J Masanz; James H Martin; Martha S Palmer; Wayne H Ward; Guergana K Savova
Journal:  AMIA Annu Symp Proc       Date:  2011-10-22

3.  Biomedical negation scope detection with conditional random fields.

Authors:  Shashank Agarwal; Hong Yu
Journal:  J Am Med Inform Assoc       Date:  2010 Nov-Dec       Impact factor: 4.497

4.  Towards spoken clinical-question answering: evaluating and adapting automatic speech-recognition systems for spoken clinical questions.

Authors:  Feifan Liu; Gokhan Tur; Dilek Hakkani-Tür; Hong Yu
Journal:  J Am Med Inform Assoc       Date:  2011-06-24       Impact factor: 4.497

5.  Automatically classifying question types for consumer health questions.

Authors:  Kirk Roberts; Halil Kilicoglu; Marcelo Fiszman; Dina Demner-Fushman
Journal:  AMIA Annu Symp Proc       Date:  2014-11-14

6.  Resource Classification for Medical Questions.

Authors:  Kirk Roberts; Laritza Rodriguez; Sonya E Shooshan; Dina Demner-Fushman
Journal:  AMIA Annu Symp Proc       Date:  2017-02-10

7.  Combining Open-domain and Biomedical Knowledge for Topic Recognition in Consumer Health Questions.

Authors:  Yassine Mrabet; Halil Kilicoglu; Kirk Roberts; Dina Demner-Fushman
Journal:  AMIA Annu Symp Proc       Date:  2017-02-10

8.  Automatically extracting information needs from complex clinical questions.

Authors:  Yong-gang Cao; James J Cimino; John Ely; Hong Yu
Journal:  J Biomed Inform       Date:  2010-07-27       Impact factor: 6.317

9.  Annotating Logical Forms for EHR Questions.

Authors:  Kirk Roberts; Dina Demner-Fushman
Journal:  LREC Int Conf Lang Resour Eval       Date:  2016-05

10.  Using the weighted keyword model to improve information retrieval for answering biomedical questions.

Authors:  Hong Yu; Yong-Gang Cao
Journal:  Summit Transl Bioinform       Date:  2009-03-01
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