Literature DB >> 17449726

A family of poly(U) polymerases.

Jae Eun Kwak1, Marvin Wickens.   

Abstract

The GLD-2 family of poly(A) polymerases add successive AMP monomers to the 3' end of specific RNAs, forming a poly(A) tail. Here, we identify a new group of GLD-2-related nucleotidyl transferases from Arabidopsis, Schizosaccharomyces pombe, Caenorhabditis elegans, and humans. Like GLD-2, these enzymes are template independent and add nucleotides to the 3' end of an RNA substrate. However, these new enzymes, which we refer to as poly(U) polymerases, add poly(U) rather than poly(A) to their RNA substrates.

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Year:  2007        PMID： 17449726      PMCID： PMC1869031          DOI： 10.1261/rna.514007

Source DB:  PubMed          Journal:  RNA        ISSN： 1355-8382            Impact factor:   4.942


  36 in total

1.  DNA polymerase beta-like nucleotidyltransferase superfamily: identification of three new families, classification and evolutionary history.

Authors:  L Aravind; E V Koonin
Journal:  Nucleic Acids Res       Date:  1999-04-01       Impact factor: 16.971

2.  Contribution of Trf4/5 and the nuclear exosome to genome stability through regulation of histone mRNA levels in Saccharomyces cerevisiae.

Authors:  Clara C Reis; Judith L Campbell
Journal:  Genetics       Date:  2006-12-18       Impact factor: 4.562

3.  Mutational analysis of mammalian poly(A) polymerase identifies a region for primer binding and catalytic domain, homologous to the family X polymerases, and to other nucleotidyltransferases.

Authors:  G Martin; W Keller
Journal:  EMBO J       Date:  1996-05-15       Impact factor: 11.598

4.  DNA polymerase beta belongs to an ancient nucleotidyltransferase superfamily.

Authors:  L Holm; C Sander
Journal:  Trends Biochem Sci       Date:  1995-09       Impact factor: 13.807

5.  Uridine addition after microRNA-directed cleavage.

Authors:  Binzhang Shen; Howard M Goodman
Journal:  Science       Date:  2004-11-05       Impact factor: 47.728

6.  Cid1, a fission yeast protein required for S-M checkpoint control when DNA polymerase delta or epsilon is inactivated.

Authors:  S W Wang; T Toda; R MacCallum; A L Harris; C Norbury
Journal:  Mol Cell Biol       Date:  2000-05       Impact factor: 4.272

7.  Poly(A) polymerase and the regulation of cytoplasmic polyadenylation.

Authors:  K S Dickson; S R Thompson; N K Gray; M Wickens
Journal:  J Biol Chem       Date:  2001-09-10       Impact factor: 5.157

8.  Caffeine can override the S-M checkpoint in fission yeast.

Authors:  S W Wang; C Norbury; A L Harris; T Toda
Journal:  J Cell Sci       Date:  1999-03       Impact factor: 5.285

9.  Genetic regulation of entry into meiosis in Caenorhabditis elegans.

Authors:  L C Kadyk; J Kimble
Journal:  Development       Date:  1998-05       Impact factor: 6.868

Review 10.  The Cid1 family of non-canonical poly(A) polymerases.

Authors:  Abigail L Stevenson; Chris J Norbury
Journal:  Yeast       Date:  2006-10-15       Impact factor: 3.239
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  78 in total

1.  Terminal uridyltransferase enzyme Zcchc11 promotes cell proliferation independent of its uridyltransferase activity.

Authors:  Matthew T Blahna; Matthew R Jones; Lee J Quinton; Kori Y Matsuura; Joseph P Mizgerd
Journal:  J Biol Chem       Date:  2011-10-17       Impact factor: 5.157

2.  Proteomic and functional analysis of the noncanonical poly(A) polymerase Cid14.

Authors:  Claudia Keller; Katrina Woolcock; Daniel Hess; Marc Bühler
Journal:  RNA       Date:  2010-04-19       Impact factor: 4.942

3.  The human cytoplasmic RNA terminal U-transferase ZCCHC11 targets histone mRNAs for degradation.

Authors:  Marie-Joëlle Schmidt; Steven West; Chris J Norbury
Journal:  RNA       Date:  2010-11-04       Impact factor: 4.942

4.  More than one way to make a tail.

Authors:  William F Marzluff
Journal:  EMBO J       Date:  2010-12-15       Impact factor: 11.598

Review 5.  RNA-specific ribonucleotidyl transferases.

Authors:  Georges Martin; Walter Keller
Journal:  RNA       Date:  2007-09-13       Impact factor: 4.942

6.  Terminal RNA uridylyltransferases of trypanosomes.

Authors:  Ruslan Aphasizhev; Inna Aphasizheva
Journal:  Biochim Biophys Acta       Date:  2007-12-23

Review 7.  Determinants of substrate specificity in RNA-dependent nucleotidyl transferases.

Authors:  Georges Martin; Sylvie Doublié; Walter Keller
Journal:  Biochim Biophys Acta       Date:  2007-12-14

Review 8.  New ways to meet your (3') end oligouridylation as a step on the path to destruction.

Authors:  Carol J Wilusz; Jeffrey Wilusz
Journal:  Genes Dev       Date:  2008-01-01       Impact factor: 11.361

Review 9.  RNA recognition by 3'-to-5' exonucleases: the substrate perspective.

Authors:  Hend Ibrahim; Jeffrey Wilusz; Carol J Wilusz
Journal:  Biochim Biophys Acta       Date:  2007-12-03

10.  Recognition of adenosine residues by the active site of poly(A)-specific ribonuclease.

Authors:  Niklas Henriksson; Per Nilsson; Mousheng Wu; Haiwei Song; Anders Virtanen
Journal:  J Biol Chem       Date:  2009-11-09       Impact factor: 5.157
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