Literature DB >> 17431174

Quantum structure of the intermolecular proton bond.

J R Roscioli1, L R McCunn, M A Johnson.   

Abstract

A proton shared between two closed-shell molecules, [A.H+.B], constitutes a ubiquitous soft binding motif in biological processes. The vibrational transitions associated with the shared proton, which provide a direct probe of this interaction, have been extensively studied in the condensed phase but have yielded only limited detailed information because of their diffuse character. We exploited recent advances in gas-phase ion spectroscopy to identify sharp spectral features that can be assigned to both the shared proton and the two tethered molecules in a survey of 18 cold, isolated [A.H+.B] ions. These data yield a picture of the intermolecular proton bond at a microscopic scale, facilitating analysis of its properties within the context of a floppy polyatomic molecule.

Year:  2007        PMID: 17431174     DOI: 10.1126/science.1138962

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  16 in total

1.  Diagnostic NH and OH vibrations for oxazolone and diketopiperazine structures: b2 from protonated triglycine.

Authors:  Da Wang; Kerim Gulyuz; Corey N Stedwell; Nick C Polfer
Journal:  J Am Soc Mass Spectrom       Date:  2011-05-13       Impact factor: 3.109

2.  Characterizing the intramolecular H-bond and secondary structure in methylated GlyGlyH+ with H2 predissociation spectroscopy.

Authors:  Christopher M Leavitt; Arron B Wolk; Michael Z Kamrath; Etienne Garand; Michael J Van Stipdonk; Mark A Johnson
Journal:  J Am Soc Mass Spectrom       Date:  2011-08-27       Impact factor: 3.109

3.  Vibrational characterization of simple peptides using cryogenic infrared photodissociation of H2-tagged, mass-selected ions.

Authors:  Michael Z Kamrath; Etienne Garand; Peter A Jordan; Christopher M Leavitt; Arron B Wolk; Michael J Van Stipdonk; Scott J Miller; Mark A Johnson
Journal:  J Am Chem Soc       Date:  2011-03-30       Impact factor: 15.419

4.  Spectroscopic Evidence for Lactam Formation in Terminal Ornithine b2+ and b3+ Fragment Ions.

Authors:  Zachary M Smith; Xiye Wang; Jonathan R Scheerer; Jonathan Martens; Giel Berden; Jos Oomens; Vincent Steinmetz; Arpad Somogyi; Vicki Wysocki; John C Poutsma
Journal:  J Am Soc Mass Spectrom       Date:  2019-06-10       Impact factor: 3.109

5.  Proton storage site in bacteriorhodopsin: new insights from quantum mechanics/molecular mechanics simulations of microscopic pK(a) and infrared spectra.

Authors:  Puja Goyal; Nilanjan Ghosh; Prasad Phatak; Maike Clemens; Michael Gaus; Marcus Elstner; Qiang Cui
Journal:  J Am Chem Soc       Date:  2011-09-06       Impact factor: 15.419

6.  Imidazole Derivatives Improve Charge Reduction and Stabilization for Native Mass Spectrometry.

Authors:  Julia A Townsend; James E Keener; Zachary M Miller; James S Prell; Michael T Marty
Journal:  Anal Chem       Date:  2019-11-05       Impact factor: 6.986

7.  Effect of Basicity and Structure on the Hydration of Protonated Molecules, Proton-Bound Dimer and Cluster Formation: An Ion Mobility-Time of Flight Mass Spectrometry and Theoretical Study.

Authors:  Younes Valadbeigi; Vahideh Ilbeigi; Bartosz Michalczuk; Martin Sabo; Stefan Matejcik
Journal:  J Am Soc Mass Spectrom       Date:  2019-05-02       Impact factor: 3.109

8.  Amine vs. carboxylic acid protonation in ortho-, meta-, and para-aminobenzoic acid: An IRMPD spectroscopy study.

Authors:  Adam P Cismesia; Georgina R Nicholls; Nicolas C Polfer
Journal:  J Mol Spectrosc       Date:  2016-11-01       Impact factor: 1.507

9.  The nature of the hydrated proton H(aq)+ in organic solvents.

Authors:  Evgenii S Stoyanov; Irina V Stoyanova; Fook S Tham; Christopher A Reed
Journal:  J Am Chem Soc       Date:  2008-08-14       Impact factor: 15.419

10.  Myths about the proton. The nature of H+ in condensed media.

Authors:  Christopher A Reed
Journal:  Acc Chem Res       Date:  2013-07-23       Impact factor: 22.384

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