Literature DB >> 17429482

Photoreceptor counting and montaging of en-face retinal images from an adaptive optics fundus camera.

Bai Xue1, Stacey S Choi, Nathan Doble, John S Werner.   

Abstract

A fast and efficient method for quantifying photoreceptor density in images obtained with an en-face flood-illuminated adaptive optics (AO) imaging system is described. To improve accuracy of cone counting, en-face images are analyzed over extended areas. This is achieved with two separate semiautomated algorithms: (1) a montaging algorithm that joins retinal images with overlapping common features without edge effects and (2) a cone density measurement algorithm that counts the individual cones in the montaged image. The accuracy of the cone density measurement algorithm is high, with >97% agreement for a simulated retinal image (of known density, with low contrast) and for AO images from normal eyes when compared with previously reported histological data. Our algorithms do not require spatial regularity in cone packing and are, therefore, useful for counting cones in diseased retinas, as demonstrated for eyes with Stargardt's macular dystrophy and retinitis pigmentosa.

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Year:  2007        PMID: 17429482      PMCID: PMC2583217          DOI: 10.1364/josaa.24.001364

Source DB:  PubMed          Journal:  J Opt Soc Am A Opt Image Sci Vis        ISSN: 1084-7529            Impact factor:   2.129


  21 in total

1.  In vivo imaging of the photoreceptor mosaic in retinal dystrophies and correlations with visual function.

Authors:  Stacey S Choi; Nathan Doble; Joseph L Hardy; Steven M Jones; John L Keltner; Scot S Olivier; John S Werner
Journal:  Invest Ophthalmol Vis Sci       Date:  2006-05       Impact factor: 4.799

2.  The reflectance of single cones in the living human eye.

Authors:  Aristofanis Pallikaris; David R Williams; Heidi Hofer
Journal:  Invest Ophthalmol Vis Sci       Date:  2003-10       Impact factor: 4.799

3.  Direct and noninvasive assessment of parafoveal capillary leukocyte velocity.

Authors:  Joy A Martin; Austin Roorda
Journal:  Ophthalmology       Date:  2005-10-27       Impact factor: 12.079

4.  High-resolution retinal imaging of cone-rod dystrophy.

Authors:  Jessica I Wolfing; Mina Chung; Joseph Carroll; Austin Roorda; David R Williams
Journal:  Ophthalmology       Date:  2006-05-02       Impact factor: 12.079

5.  MEMS-based adaptive optics scanning laser ophthalmoscopy.

Authors:  Yuhua Zhang; Siddharth Poonja; Austin Roorda
Journal:  Opt Lett       Date:  2006-05-01       Impact factor: 3.776

6.  Effect of wavelength on in vivo images of the human cone mosaic.

Authors:  Stacey S Choi; Nathan Doble; Julianna Lin; Julian Christou; David R Williams
Journal:  J Opt Soc Am A Opt Image Sci Vis       Date:  2005-12       Impact factor: 2.129

7.  Supernormal vision and high-resolution retinal imaging through adaptive optics.

Authors:  J Liang; D R Williams; D T Miller
Journal:  J Opt Soc Am A Opt Image Sci Vis       Date:  1997-11       Impact factor: 2.129

8.  Automated counting of mammalian cell colonies.

Authors:  P R Barber; B Vojnovic; J Kelly; C R Mayes; P Boulton; M Woodcock; M C Joiner
Journal:  Phys Med Biol       Date:  2001-01       Impact factor: 3.609

9.  Cytoarchitecture of the retinal ganglion cells in the rat.

Authors:  John Danias; Fran Shen; David Goldblum; Bin Chen; Jerome Ramos-Esteban; Steven M Podos; Thom Mittag
Journal:  Invest Ophthalmol Vis Sci       Date:  2002-03       Impact factor: 4.799

10.  Functional photoreceptor loss revealed with adaptive optics: an alternate cause of color blindness.

Authors:  Joseph Carroll; Maureen Neitz; Heidi Hofer; Jay Neitz; David R Williams
Journal:  Proc Natl Acad Sci U S A       Date:  2004-05-17       Impact factor: 11.205

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  34 in total

1.  Single cell imaging of the chick retina with adaptive optics.

Authors:  Kenneth Headington; Stacey S Choi; Debora Nickla; Nathan Doble
Journal:  Curr Eye Res       Date:  2011-10       Impact factor: 2.424

2.  Semi-automated identification of cones in the human retina using circle Hough transform.

Authors:  Danuta M Bukowska; Avenell L Chew; Emily Huynh; Irwin Kashani; Sue Ling Wan; Pak Ming Wan; Fred K Chen
Journal:  Biomed Opt Express       Date:  2015-11-03       Impact factor: 3.732

3.  Assessment of Different Sampling Methods for Measuring and Representing Macular Cone Density Using Flood-Illuminated Adaptive Optics.

Authors:  Shu Feng; Michael J Gale; Jonathan D Fay; Ambar Faridi; Hope E Titus; Anupam K Garg; Keith V Michaels; Laura R Erker; Dawn Peters; Travis B Smith; Mark E Pennesi
Journal:  Invest Ophthalmol Vis Sci       Date:  2015-09       Impact factor: 4.799

4.  Simultaneous imaging of human cone mosaic with adaptive optics enhanced scanning laser ophthalmoscopy and high-speed transversal scanning optical coherence tomography.

Authors:  M Pircher; R J Zawadzki; J W Evans; J S Werner; C K Hitzenberger
Journal:  Opt Lett       Date:  2008-01-01       Impact factor: 3.776

Review 5.  Dry age-related macular degeneration: mechanisms, therapeutic targets, and imaging.

Authors:  Catherine Bowes Rickman; Sina Farsiu; Cynthia A Toth; Mikael Klingeborn
Journal:  Invest Ophthalmol Vis Sci       Date:  2013-12-13       Impact factor: 4.799

6.  Influence of sampling window size and orientation on parafoveal cone packing density.

Authors:  Marco Lombardo; Sebastiano Serrao; Pietro Ducoli; Giuseppe Lombardo
Journal:  Biomed Opt Express       Date:  2013-07-12       Impact factor: 3.732

7.  The organization of the cone photoreceptor mosaic measured in the living human retina.

Authors:  Lucie Sawides; Alberto de Castro; Stephen A Burns
Journal:  Vision Res       Date:  2016-08-03       Impact factor: 1.886

8.  Spatial distribution of macular birefringence associated with the Henle fibers.

Authors:  Ann E Elsner; Anke Weber; Michael C Cheney; Dean A Vannasdale
Journal:  Vision Res       Date:  2008-06-16       Impact factor: 1.886

9.  Automated identification of cone photoreceptors in adaptive optics optical coherence tomography images using transfer learning.

Authors:  Morgan Heisler; Myeong Jin Ju; Mahadev Bhalla; Nathan Schuck; Arman Athwal; Eduardo V Navajas; Mirza Faisal Beg; Marinko V Sarunic
Journal:  Biomed Opt Express       Date:  2018-10-10       Impact factor: 3.732

10.  Fourier-domain optical coherence tomography and adaptive optics reveal nerve fiber layer loss and photoreceptor changes in a patient with optic nerve drusen.

Authors:  Stacey S Choi; Robert J Zawadzki; Mark A Greiner; John S Werner; John L Keltner
Journal:  J Neuroophthalmol       Date:  2008-06       Impact factor: 3.042

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