Literature DB >> 17401337

Synthesis of TOAC spin-labeled proteins and reconstitution in lipid membranes.

Christine B Karim1, Zhiwen Zhang, David D Thomas.   

Abstract

A procedure is described for the synthetic incorporation into membrane proteins of the non-natural amino acid TOAC (2,2,6,6-tetramethyl-piperidine-1-oxyl-4-amino-4-carboxylic acid), which is coupled rigidly to the alpha-carbon, providing direct detection of peptide backbone dynamics by electron paramagnetic resonance (EPR). Also included is a protocol for the functional reconstitution of the spin-labeled protein in lipid vesicles. This protocol can be completed in 17 d.

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Year:  2007        PMID: 17401337     DOI: 10.1038/nprot.2007.2

Source DB:  PubMed          Journal:  Nat Protoc        ISSN: 1750-2799            Impact factor:   13.491


  25 in total

1.  Rotational dynamics of phospholamban determined by multifrequency electron paramagnetic resonance.

Authors:  Yuri E Nesmelov; Christine B Karim; Likai Song; Peter G Fajer; David D Thomas
Journal:  Biophys J       Date:  2007-06-15       Impact factor: 4.033

2.  Open and closed conformations of the isolated transmembrane domain of death receptor 5 support a new model of activation.

Authors:  Andrew K Lewis; Zachary M James; Jesse E McCaffrey; Anthony R Braun; Christine B Karim; David D Thomas; Jonathan N Sachs
Journal:  Biophys J       Date:  2014-03-18       Impact factor: 4.033

3.  Structural dynamics of the actomyosin complex probed by a bifunctional spin label that cross-links SH1 and SH2.

Authors:  Andrew R Thompson; Nariman Naber; Clyde Wilson; Roger Cooke; David D Thomas
Journal:  Biophys J       Date:  2008-09-19       Impact factor: 4.033

Review 4.  Paramagnetic labelling of proteins and oligonucleotides for NMR.

Authors:  Xun-Cheng Su; Gottfried Otting
Journal:  J Biomol NMR       Date:  2009-06-16       Impact factor: 2.835

5.  Spectroscopic validation of the pentameric structure of phospholamban.

Authors:  Nathaniel J Traaseth; Raffaello Verardi; Kurt D Torgersen; Christine B Karim; David D Thomas; Gianluigi Veglia
Journal:  Proc Natl Acad Sci U S A       Date:  2007-09-05       Impact factor: 11.205

6.  Pulse dipolar ESR of doubly labeled mini TAR DNA and its annealing to mini TAR RNA.

Authors:  Yan Sun; Peter P Borbat; Vladimir M Grigoryants; William K Myers; Jack H Freed; Charles P Scholes
Journal:  Biophys J       Date:  2015-02-17       Impact factor: 4.033

7.  Protein-protein interactions in calcium transport regulation probed by saturation transfer electron paramagnetic resonance.

Authors:  Zachary M James; Jesse E McCaffrey; Kurt D Torgersen; Christine B Karim; David D Thomas
Journal:  Biophys J       Date:  2012-09-19       Impact factor: 4.033

8.  Calcium-Dependent Structural Dynamics of a Spin-Labeled RyR Peptide Bound to Calmodulin.

Authors:  Cheng Her; Jesse E McCaffrey; David D Thomas; Christine B Karim
Journal:  Biophys J       Date:  2016-12-06       Impact factor: 4.033

9.  Distance measurements on a dual-labeled TOAC AChR M2δ peptide in mechanically aligned DMPC bilayers via dipolar broadening CW-EPR spectroscopy.

Authors:  Harishchandra Ghimire; Eric J Hustedt; Indra D Sahu; Johnson J Inbaraj; Robert McCarrick; Daniel J Mayo; Monica R Benedikt; Ryan T Lee; Stuart M Grosser; Gary A Lorigan
Journal:  J Phys Chem B       Date:  2012-03-19       Impact factor: 2.991

10.  Conformational Dynamics in Extended RGD-Containing Peptides.

Authors:  William R Lindemann; Alexander J Mijalis; José L Alonso; Peter P Borbat; Jack H Freed; M Amin Arnaout; Bradley L Pentelute; Julia H Ortony
Journal:  Biomacromolecules       Date:  2020-06-16       Impact factor: 6.988

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