Literature DB >> 17401208

Cloning, expression, purification, crystallization and preliminary crystallographic analysis of selenomethionine-labelled KaiC-like protein PH0186 from Pyrococcus horikoshii OT3.

Hua Ming1, Ken-ichi Miyazono, Masaru Tanokura.   

Abstract

KaiC is the central protein in the circadian-clock system of cyanobacteria. A selenomethionine-labelled KaiC-homologous protein from Pyrococcus horikoshii OT3 (PH0186; 28 kDa) was crystallized by the sitting-drop vapour-diffusion method using ethanol as a precipitant. The crystals diffracted X-rays to beyond 2.0 A resolution using a synchrotron-radiation source. The space group of the crystals was determined to be C2, with unit-cell parameters a = 173.7, b = 51.8, c = 97.5 A, beta = 122.8 degrees. The crystal contains three molecules in the asymmetric unit (V(M) = 2.2 A(3) Da(-1)) and has a solvent content of 43.5%. Sixfold noncrystallographic symmetry was identified from self-rotation calculations, assuming the presence of a hexamer in the crystal.

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Year:  2007        PMID: 17401208      PMCID: PMC2330226          DOI: 10.1107/S1744309107011402

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  15 in total

1.  Nucleotide binding and autophosphorylation of the clock protein KaiC as a circadian timing process of cyanobacteria.

Authors:  T Nishiwaki; H Iwasaki; M Ishiura; T Kondo
Journal:  Proc Natl Acad Sci U S A       Date:  2000-01-04       Impact factor: 11.205

2.  Origin and evolution of circadian clock genes in prokaryotes.

Authors:  Volodymyr Dvornyk; Oxana Vinogradova; Eviatar Nevo
Journal:  Proc Natl Acad Sci U S A       Date:  2003-02-25       Impact factor: 11.205

3.  Structure and function from the circadian clock protein KaiA of Synechococcus elongatus: a potential clock input mechanism.

Authors:  Stanly B Williams; Ioannis Vakonakis; Susan S Golden; Andy C LiWang
Journal:  Proc Natl Acad Sci U S A       Date:  2002-11-15       Impact factor: 11.205

4.  Cyanobacterial circadian clockwork: roles of KaiA, KaiB and the kaiBC promoter in regulating KaiC.

Authors:  Yao Xu; Tetsuya Mori; Carl Hirschie Johnson
Journal:  EMBO J       Date:  2003-05-01       Impact factor: 11.598

5.  Visualizing a circadian clock protein: crystal structure of KaiC and functional insights.

Authors:  Rekha Pattanayek; Jimin Wang; Tetsuya Mori; Yao Xu; Carl Hirschie Johnson; Martin Egli
Journal:  Mol Cell       Date:  2004-08-13       Impact factor: 17.970

6.  Hexamerization by the N-terminal domain and intersubunit phosphorylation by the C-terminal domain of cyanobacterial circadian clock protein KaiC.

Authors:  Fumio Hayashi; Ryo Iwase; Tatsuya Uzumaki; Masahiro Ishiura
Journal:  Biochem Biophys Res Commun       Date:  2006-07-31       Impact factor: 3.575

7.  Expression of a gene cluster kaiABC as a circadian feedback process in cyanobacteria.

Authors:  M Ishiura; S Kutsuna; S Aoki; H Iwasaki; C R Andersson; A Tanabe; S S Golden; C H Johnson; T Kondo
Journal:  Science       Date:  1998-09-04       Impact factor: 47.728

8.  Preparation of selenomethionyl proteins for phase determination.

Authors:  S Doublié
Journal:  Methods Enzymol       Date:  1997       Impact factor: 1.600

9.  ATP-induced hexameric ring structure of the cyanobacterial circadian clock protein KaiC.

Authors:  Fumio Hayashi; Hirofumi Suzuki; Ryo Iwase; Tatsuya Uzumaki; Asako Miyake; Jian-Ren Shen; Katsumi Imada; Yukio Furukawa; Koji Yonekura; Keiichi Namba; Masahiro Ishiura
Journal:  Genes Cells       Date:  2003-03       Impact factor: 1.891

10.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

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  3 in total

Review 1.  The itty-bitty time machine genetics of the cyanobacterial circadian clock.

Authors:  Shannon R Mackey; Susan S Golden; Jayna L Ditty
Journal:  Adv Genet       Date:  2011       Impact factor: 1.944

2.  Single molecules can operate as primitive biological sensors, switches and oscillators.

Authors:  Rosa D Hernansaiz-Ballesteros; Luca Cardelli; Attila Csikász-Nagy
Journal:  BMC Syst Biol       Date:  2018-06-18

3.  Light-dependent expression of four cryptic archaeal circadian gene homologs.

Authors:  Michael Maniscalco; Jennifer Nannen; Valerie Sodi; Gillian Silver; Phillip L Lowrey; Kelly A Bidle
Journal:  Front Microbiol       Date:  2014-03-04       Impact factor: 5.640

  3 in total

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