Literature DB >> 21924974

The itty-bitty time machine genetics of the cyanobacterial circadian clock.

Shannon R Mackey1, Susan S Golden, Jayna L Ditty.   

Abstract

The cyanobacterium Synechococcus elongatus PCC 7942 has been used as the prokaryotic model system for the study of circadian rhythms for the past two decades. Its genetic malleability has been instrumental in the discovery of key input, oscillator, and output components and has also provided monumental insights into the mechanism by which proteins function to maintain and dictate 24-h time. In addition, basic research into the prokaryotic system has led to interesting advances in eukaryotic circadian mechanisms. Undoubtedly, continued genetic and mutational analyses of this single-celled cyanobacterium will aid in teasing out the intricacies of the Kai-based circadian clock to advance our understanding of this system as well as other more "complex" systems.
Copyright © 2011 Elsevier Inc. All rights reserved.

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Year:  2011        PMID: 21924974      PMCID: PMC3319097          DOI: 10.1016/B978-0-12-387690-4.00002-7

Source DB:  PubMed          Journal:  Adv Genet        ISSN: 0065-2660            Impact factor:   1.944


  125 in total

Review 1.  Molecular bases of circadian rhythms.

Authors:  S L Harmer; S Panda; S A Kay
Journal:  Annu Rev Cell Dev Biol       Date:  2001       Impact factor: 13.827

2.  Visualizing a circadian clock protein: crystal structure of KaiC and functional insights.

Authors:  Rekha Pattanayek; Jimin Wang; Tetsuya Mori; Yao Xu; Carl Hirschie Johnson; Martin Egli
Journal:  Mol Cell       Date:  2004-08-13       Impact factor: 17.970

3.  LdpA: a component of the circadian clock senses redox state of the cell.

Authors:  Natalia B Ivleva; Matthew R Bramlett; Paul A Lindahl; Susan S Golden
Journal:  EMBO J       Date:  2005-03-10       Impact factor: 11.598

4.  Transcriptional regulation of the circadian clock operon kaiBC by upstream regions in cyanobacteria.

Authors:  Shinsuke Kutsuna; Yoichi Nakahira; Mitsunori Katayama; Masahiro Ishiura; Takao Kondo
Journal:  Mol Microbiol       Date:  2005-09       Impact factor: 3.501

5.  Circadian Rhythm of the Prokaryote Synechococcus sp. RF-1.

Authors:  T C Huang; J Tu; T J Chow; T H Chen
Journal:  Plant Physiol       Date:  1990-02       Impact factor: 8.340

6.  A sequential program of dual phosphorylation of KaiC as a basis for circadian rhythm in cyanobacteria.

Authors:  Taeko Nishiwaki; Yoshinori Satomi; Yohko Kitayama; Kazuki Terauchi; Reiko Kiyohara; Toshifumi Takao; Takao Kondo
Journal:  EMBO J       Date:  2007-08-23       Impact factor: 11.598

7.  Conjugal transfer of DNA to cyanobacteria.

Authors:  J Elhai; C P Wolk
Journal:  Methods Enzymol       Date:  1988       Impact factor: 1.600

8.  Structural and biochemical characterization of a cyanobacterium circadian clock-modifier protein.

Authors:  Kyouhei Arita; Hiroshi Hashimoto; Kumiko Igari; Mayuko Akaboshi; Shinsuke Kutsuna; Mamoru Sato; Toshiyuki Shimizu
Journal:  J Biol Chem       Date:  2006-11-10       Impact factor: 5.157

9.  Regulation of circadian clock gene expression by phosphorylation states of KaiC in cyanobacteria.

Authors:  Yoriko Murayama; Tokitaka Oyama; Takao Kondo
Journal:  J Bacteriol       Date:  2007-12-28       Impact factor: 3.490

10.  Monomer-shuffling and allosteric transition in KaiC circadian oscillation.

Authors:  Mitsumasa Yoda; Kohei Eguchi; Tomoki P Terada; Masaki Sasai
Journal:  PLoS One       Date:  2007-05-02       Impact factor: 3.240

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  29 in total

1.  High-throughput and quantitative approaches for measuring circadian rhythms in cyanobacteria using bioluminescence.

Authors:  Ryan K Shultzaberger; Mark L Paddock; Takeo Katsuki; Ralph J Greenspan; Susan S Golden
Journal:  Methods Enzymol       Date:  2014-12-26       Impact factor: 1.600

2.  An allele of the crm gene blocks cyanobacterial circadian rhythms.

Authors:  Joseph S Boyd; Juliana R Bordowitz; Anna C Bree; Susan S Golden
Journal:  Proc Natl Acad Sci U S A       Date:  2013-08-05       Impact factor: 11.205

3.  The Legionella pneumophila kai operon is implicated in stress response and confers fitness in competitive environments.

Authors:  Maria Loza-Correa; Tobias Sahr; Monica Rolando; Craig Daniels; Pierre Petit; Tania Skarina; Laura Gomez Valero; Delphine Dervins-Ravault; Nadine Honoré; Aleksey Savchenko; Carmen Buchrieser
Journal:  Environ Microbiol       Date:  2013-08-19       Impact factor: 5.491

4.  Systems biology: How bacteria choose a lifestyle.

Authors:  James C W Locke
Journal:  Nature       Date:  2013-11-20       Impact factor: 49.962

5.  The circadian oscillator in Synechococcus elongatus controls metabolite partitioning during diurnal growth.

Authors:  Spencer Diamond; Darae Jun; Benjamin E Rubin; Susan S Golden
Journal:  Proc Natl Acad Sci U S A       Date:  2015-03-30       Impact factor: 11.205

6.  Genome-wide fitness assessment during diurnal growth reveals an expanded role of the cyanobacterial circadian clock protein KaiA.

Authors:  David G Welkie; Benjamin E Rubin; Yong-Gang Chang; Spencer Diamond; Scott A Rifkin; Andy LiWang; Susan S Golden
Journal:  Proc Natl Acad Sci U S A       Date:  2018-07-10       Impact factor: 11.205

7.  Extreme conservation and non-neutral evolution of the cpmA Circadian locus in a globally distributed Chroococcidiopsis sp. from naturally stressful habitats.

Authors:  Volodymyr Dvornyk; Akhee Sabiha Jahan
Journal:  Mol Biol Evol       Date:  2012-07-25       Impact factor: 16.240

Review 8.  Primer on agar-based microbial imaging mass spectrometry.

Authors:  Jane Y Yang; Vanessa V Phelan; Ryan Simkovsky; Jeramie D Watrous; Rachelle M Trial; Tinya C Fleming; Roland Wenter; Bradley S Moore; Susan S Golden; Kit Pogliano; Pieter C Dorrestein
Journal:  J Bacteriol       Date:  2012-07-20       Impact factor: 3.490

9.  Active output state of the Synechococcus Kai circadian oscillator.

Authors:  Mark L Paddock; Joseph S Boyd; Dawn M Adin; Susan S Golden
Journal:  Proc Natl Acad Sci U S A       Date:  2013-09-16       Impact factor: 11.205

10.  Reciprocal interaction of the circadian clock with the iron homeostasis network in Arabidopsis.

Authors:  Sunghyun Hong; Sun A Kim; Mary Lou Guerinot; C Robertson McClung
Journal:  Plant Physiol       Date:  2012-12-18       Impact factor: 8.340

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