Literature DB >> 17374383

An evolutionary hybrid cellular automaton model of solid tumour growth.

P Gerlee1, A R A Anderson.   

Abstract

We propose a cellular automaton model of solid tumour growth, in which each cell is equipped with a micro-environment response network. This network is modelled using a feed-forward artificial neural network, that takes environmental variables as an input and from these determines the cellular behaviour as the output. The response of the network is determined by connection weights and thresholds in the network, which are subject to mutations when the cells divide. As both available space and nutrients are limited resources for the tumour, this gives rise to clonal evolution where only the fittest cells survive. Using this approach we have investigated the impact of the tissue oxygen concentration on the growth and evolutionary dynamics of the tumour. The results show that the oxygen concentration affects the selection pressure, cell population diversity and morphology of the tumour. A low oxygen concentration in the tissue gives rise to a tumour with a fingered morphology that contains aggressive phenotypes with a small apoptotic potential, while a high oxygen concentration in the tissue gives rise to a tumour with a round morphology containing less evolved phenotypes. The tissue oxygen concentration thus affects the tumour at both the morphological level and on the phenotype level.

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Year:  2007        PMID: 17374383      PMCID: PMC2652069          DOI: 10.1016/j.jtbi.2007.01.027

Source DB:  PubMed          Journal:  J Theor Biol        ISSN: 0022-5193            Impact factor:   2.691


  44 in total

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Journal:  J Theor Biol       Date:  2000-04-21       Impact factor: 2.691

2.  Emergence of a subpopulation in a computational model of tumor growth.

Authors:  A R Kansal; S Torquato; E A Chiocca; T S Deisboeck
Journal:  J Theor Biol       Date:  2000-12-07       Impact factor: 2.691

3.  A cellular automaton model of early tumor growth and invasion.

Authors:  A A Patel; E T Gawlinski; S K Lemieux; R A Gatenby
Journal:  J Theor Biol       Date:  2001-12-07       Impact factor: 2.691

4.  Neural model of the genetic network.

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Journal:  J Biol Chem       Date:  2001-06-06       Impact factor: 5.157

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Authors:  J L Castro; C J Mantas; J M Benítez
Journal:  Neural Netw       Date:  2000-07

Review 6.  Apoptosis in cancer.

Authors:  S W Lowe; A W Lin
Journal:  Carcinogenesis       Date:  2000-03       Impact factor: 4.944

7.  Tissue gradients of energy metabolites mirror oxygen tension gradients in a rat mammary carcinoma model.

Authors:  S Walenta; S Snyder; Z A Haroon; R D Braun; K Amin; D Brizel; W Mueller-Klieser; B Chance; M W Dewhirst
Journal:  Int J Radiat Oncol Biol Phys       Date:  2001-11-01       Impact factor: 7.038

8.  Reaction-diffusion model for the growth of avascular tumor.

Authors:  S C Ferreira; M L Martins; M J Vilela
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9.  Tumor morphology and phenotypic evolution driven by selective pressure from the microenvironment.

Authors:  Alexander R A Anderson; Alissa M Weaver; Peter T Cummings; Vito Quaranta
Journal:  Cell       Date:  2006-12-01       Impact factor: 41.582

10.  Prediction of breast cancer malignancy using an artificial neural network.

Authors:  C E Floyd; J Y Lo; A J Yun; D C Sullivan; P J Kornguth
Journal:  Cancer       Date:  1994-12-01       Impact factor: 6.860

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  62 in total

Review 1.  Systems immunology: a survey of modeling formalisms, applications and simulation tools.

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Journal:  Immunol Res       Date:  2012-09       Impact factor: 2.829

2.  An Adaptive Multigrid Algorithm for Simulating Solid Tumor Growth Using Mixture Models.

Authors:  S M Wise; J S Lowengrub; V Cristini
Journal:  Math Comput Model       Date:  2011-01-01

3.  A spatial model of tumor-host interaction: application of chemotherapy.

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Journal:  Math Biosci Eng       Date:  2009-07       Impact factor: 2.080

4.  The role of extracellular matrix in glioma invasion: a cellular Potts model approach.

Authors:  Brenda M Rubenstein; Laura J Kaufman
Journal:  Biophys J       Date:  2008-10-03       Impact factor: 4.033

5.  Predicting in vivo glioma growth with the reaction diffusion equation constrained by quantitative magnetic resonance imaging data.

Authors:  David A Hormuth; Jared A Weis; Stephanie L Barnes; Michael I Miga; Erin C Rericha; Vito Quaranta; Thomas E Yankeelov
Journal:  Phys Biol       Date:  2015-06-04       Impact factor: 2.583

Review 6.  Evolving homeostatic tissue using genetic algorithms.

Authors:  Philip Gerlee; David Basanta; Alexander R A Anderson
Journal:  Prog Biophys Mol Biol       Date:  2011-03-23       Impact factor: 3.667

7.  Front instabilities and invasiveness of simulated avascular tumors.

Authors:  Nikodem J Popławski; Ubirajara Agero; J Scott Gens; Maciej Swat; James A Glazier; Alexander R A Anderson
Journal:  Bull Math Biol       Date:  2009-02-21       Impact factor: 1.758

8.  Spatial invasion dynamics on random and unstructured meshes: implications for heterogeneous tumor populations.

Authors:  V S K Manem; M Kohandel; N L Komarova; S Sivaloganathan
Journal:  J Theor Biol       Date:  2014-01-23       Impact factor: 2.691

9.  Evolution of cell motility in an individual-based model of tumour growth.

Authors:  P Gerlee; A R A Anderson
Journal:  J Theor Biol       Date:  2009-03-12       Impact factor: 2.691

10.  Microenvironmental independence associated with tumor progression.

Authors:  Alexander R A Anderson; Mohamed Hassanein; Kevin M Branch; Jenny Lu; Nichole A Lobdell; Julie Maier; David Basanta; Brandy Weidow; Archana Narasanna; Carlos L Arteaga; Albert B Reynolds; Vito Quaranta; Lourdes Estrada; Alissa M Weaver
Journal:  Cancer Res       Date:  2009-11-03       Impact factor: 12.701

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