Literature DB >> 21076663

An Adaptive Multigrid Algorithm for Simulating Solid Tumor Growth Using Mixture Models.

S M Wise1, J S Lowengrub, V Cristini.   

Abstract

In this paper we give the details of the numerical solution of a three-dimensional multispecies diffuse interface model of tumor growth, which was derived in (Wise et al., J. Theor. Biol. 253 (2008)) and used to study the development of glioma in (Frieboes et al., NeuroImage 37 (2007) and tumor invasion in (Bearer et al., Cancer Research, 69 (2009)) and (Frieboes et al., J. Theor. Biol. 264 (2010)). The model has a thermodynamic basis, is related to recently developed mixture models, and is capable of providing a detailed description of tumor progression. It utilizes a diffuse interface approach, whereby sharp tumor boundaries are replaced by narrow transition layers that arise due to differential adhesive forces among the cell-species. The model consists of fourth-order nonlinear advection-reaction-diffusion equations (of Cahn-Hilliard-type) for the cell-species coupled with reaction-diffusion equations for the substrate components. Numerical solution of the model is challenging because the equations are coupled, highly nonlinear, and numerically stiff. In this paper we describe a fully adaptive, nonlinear multigrid/finite difference method for efficiently solving the equations. We demonstrate the convergence of the algorithm and we present simulations of tumor growth in 2D and 3D that demonstrate the capabilities of the algorithm in accurately and efficiently simulating the progression of tumors with complex morphologies.

Entities:  

Year:  2011        PMID: 21076663      PMCID: PMC2976552          DOI: 10.1016/j.mcm.2010.07.007

Source DB:  PubMed          Journal:  Math Comput Model        ISSN: 0895-7177


  56 in total

1.  Mathematical modelling of the loss of tissue compression responsiveness and its role in solid tumour development.

Authors:  M A J Chaplain; L Graziano; L Preziosi
Journal:  Math Med Biol       Date:  2006-04-28       Impact factor: 1.854

2.  A continuum approach to modelling cell-cell adhesion.

Authors:  Nicola J Armstrong; Kevin J Painter; Jonathan A Sherratt
Journal:  J Theor Biol       Date:  2006-06-07       Impact factor: 2.691

3.  A cell-based model exhibiting branching and anastomosis during tumor-induced angiogenesis.

Authors:  Amy L Bauer; Trachette L Jackson; Yi Jiang
Journal:  Biophys J       Date:  2007-02-02       Impact factor: 4.033

4.  Generalized Cahn-Hilliard equation for biological applications.

Authors:  Evgeniy Khain; Leonard M Sander
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2008-05-28

5.  Simulating the hallmarks of cancer.

Authors:  Robert G Abbott; Stephanie Forrest; Kenneth J Pienta
Journal:  Artif Life       Date:  2006       Impact factor: 0.667

6.  Nonlinear modelling of cancer: bridging the gap between cells and tumours.

Authors:  J S Lowengrub; H B Frieboes; F Jin; Y-L Chuang; X Li; P Macklin; S M Wise; V Cristini
Journal:  Nonlinearity       Date:  2010

7.  A single-cell-based model of tumor growth in vitro: monolayers and spheroids.

Authors:  Dirk Drasdo; Stefan Höhme
Journal:  Phys Biol       Date:  2005-07-12       Impact factor: 2.583

8.  Growth of nonnecrotic tumors in the presence and absence of inhibitors.

Authors:  H M Byrne; M A Chaplain
Journal:  Math Biosci       Date:  1995-12       Impact factor: 2.144

9.  A hybrid cellular automaton model of clonal evolution in cancer: the emergence of the glycolytic phenotype.

Authors:  P Gerlee; A R A Anderson
Journal:  J Theor Biol       Date:  2007-11-04       Impact factor: 2.691

10.  The role of cell-cell interactions in a two-phase model for avascular tumour growth.

Authors:  C J W Breward; H M Byrne; C E Lewis
Journal:  J Math Biol       Date:  2002-08       Impact factor: 2.259

View more
  14 in total

1.  A stable scheme for a nonlinear, multiphase tumor growth model with an elastic membrane.

Authors:  Ying Chen; Steven M Wise; Vivek B Shenoy; John S Lowengrub
Journal:  Int J Numer Method Biomed Eng       Date:  2014-01-17       Impact factor: 2.747

2.  Model of vascular desmoplastic multispecies tumor growth.

Authors:  Chin F Ng; Hermann B Frieboes
Journal:  J Theor Biol       Date:  2017-05-18       Impact factor: 2.691

3.  Multispecies model of cell lineages and feedback control in solid tumors.

Authors:  H Youssefpour; X Li; A D Lander; J S Lowengrub
Journal:  J Theor Biol       Date:  2012-03-31       Impact factor: 2.691

4.  Three-Dimensional Spatiotemporal Modeling of Colon Cancer Organoids Reveals that Multimodal Control of Stem Cell Self-Renewal is a Critical Determinant of Size and Shape in Early Stages of Tumor Growth.

Authors:  Huaming Yan; Anna Konstorum; John S Lowengrub
Journal:  Bull Math Biol       Date:  2017-07-05       Impact factor: 1.758

5.  Nonlinear modelling of cancer: bridging the gap between cells and tumours.

Authors:  J S Lowengrub; H B Frieboes; F Jin; Y-L Chuang; X Li; P Macklin; S M Wise; V Cristini
Journal:  Nonlinearity       Date:  2010

6.  Multiscale Modeling of Glioblastoma Suggests that the Partial Disruption of Vessel/Cancer Stem Cell Crosstalk Can Promote Tumor Regression Without Increasing Invasiveness.

Authors:  Huaming Yan; Monica Romero-Lopez; Hermann B Frieboes; Christopher C W Hughes; John S Lowengrub
Journal:  IEEE Trans Biomed Eng       Date:  2016-10-07       Impact factor: 4.538

7.  Strategies for efficient numerical implementation of hybrid multi-scale agent-based models to describe biological systems.

Authors:  Nicholas A Cilfone; Denise E Kirschner; Jennifer J Linderman
Journal:  Cell Mol Bioeng       Date:  2015-03       Impact factor: 2.321

8.  Three-dimensional multispecies nonlinear tumor growth--I Model and numerical method.

Authors:  S M Wise; J S Lowengrub; H B Frieboes; V Cristini
Journal:  J Theor Biol       Date:  2008-03-28       Impact factor: 2.691

9.  Tumor growth in complex, evolving microenvironmental geometries: a diffuse domain approach.

Authors:  Ying Chen; John S Lowengrub
Journal:  J Theor Biol       Date:  2014-07-09       Impact factor: 2.691

10.  A Visually Apparent and Quantifiable CT Imaging Feature Identifies Biophysical Subtypes of Pancreatic Ductal Adenocarcinoma.

Authors:  Eugene J Koay; Yeonju Lee; Vittorio Cristini; John S Lowengrub; Ya'an Kang; F Anthony San Lucas; Brian P Hobbs; Rong Ye; Dalia Elganainy; Muayad Almahariq; Ahmed M Amer; Deyali Chatterjee; Huaming Yan; Peter C Park; Mayrim V Rios Perez; Dali Li; Naveen Garg; Kim A Reiss; Shun Yu; Anil Chauhan; Mohamed Zaid; Newsha Nikzad; Robert A Wolff; Milind Javle; Gauri R Varadhachary; Rachna T Shroff; Prajnan Das; Jeffrey E Lee; Mauro Ferrari; Anirban Maitra; Cullen M Taniguchi; Michael P Kim; Christopher H Crane; Matthew H Katz; Huamin Wang; Priya Bhosale; Eric P Tamm; Jason B Fleming
Journal:  Clin Cancer Res       Date:  2018-08-06       Impact factor: 12.531

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.