Literature DB >> 17317147

Transcriptional regulation at the nuclear pore complex.

Christopher R Brown1, Pamela A Silver.   

Abstract

The nonrandom spatial distribution of chromosomes and genes in the eukaryotic nucleus has been appreciated for decades, although a detailed understanding of the functional role of such positioning has remained illusive. The most prominent structural feature of the nucleus is the nuclear periphery, classically considered as a zone of gene repression caused by the presence of heterochromatin and silencing factors. However, several recent studies have uncovered dynamic associations between nuclear pore complexes embedded in the nuclear membrane and actively transcribed genes. These interactions, mediated by DNA, RNA and proteins, add an additional level of control to eukaryotic gene expression. The existence of a peripheral transcriptional activation zone in the nucleus suggests that the spatial organization of the genome plays a significant role in transcriptional regulation.

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Year:  2007        PMID: 17317147     DOI: 10.1016/j.gde.2007.02.005

Source DB:  PubMed          Journal:  Curr Opin Genet Dev        ISSN: 0959-437X            Impact factor:   5.578


  46 in total

1.  Atlas of Subcellular RNA Localization Revealed by APEX-Seq.

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Journal:  Cell       Date:  2019-06-20       Impact factor: 41.582

Review 2.  Moving chromatin within the interphase nucleus-controlled transitions?

Authors:  Chien-Hui Chuang; Andrew S Belmont
Journal:  Semin Cell Dev Biol       Date:  2007-08-25       Impact factor: 7.727

Review 3.  Chromatin dynamics and gene positioning.

Authors:  R Ileng Kumaran; Rajika Thakar; David L Spector
Journal:  Cell       Date:  2008-03-21       Impact factor: 41.582

4.  Mlp1 acts as a mitotic scaffold to spatially regulate spindle assembly checkpoint proteins in Aspergillus nidulans.

Authors:  Colin P De Souza; Shahr B Hashmi; Tania Nayak; Berl Oakley; Stephen A Osmani
Journal:  Mol Biol Cell       Date:  2009-02-18       Impact factor: 4.138

Review 5.  Biology and biophysics of the nuclear pore complex and its components.

Authors:  Roderick Y H Lim; Katharine S Ullman; Birthe Fahrenkrog
Journal:  Int Rev Cell Mol Biol       Date:  2008       Impact factor: 6.813

6.  Capture of AT-rich chromatin by ELYS recruits POM121 and NDC1 to initiate nuclear pore assembly.

Authors:  Beth A Rasala; Corinne Ramos; Amnon Harel; Douglass J Forbes
Journal:  Mol Biol Cell       Date:  2008-07-02       Impact factor: 4.138

7.  The Iws1:Spt6:CTD complex controls cotranscriptional mRNA biosynthesis and HYPB/Setd2-mediated histone H3K36 methylation.

Authors:  Sunnie M Yoh; Joseph S Lucas; Katherine A Jones
Journal:  Genes Dev       Date:  2008-12-15       Impact factor: 11.361

8.  The meaning of gene positioning.

Authors:  Takumi Takizawa; Karen J Meaburn; Tom Misteli
Journal:  Cell       Date:  2008-10-03       Impact factor: 41.582

9.  Mechanism and a peptide motif for targeting peripheral proteins to the yeast inner nuclear membrane.

Authors:  Tsung-Po Lai; Karen A Stauffer; Athulaprabha Murthi; Hussam H Shaheen; Gang Peng; Nancy C Martin; Anita K Hopper
Journal:  Traffic       Date:  2009-06-15       Impact factor: 6.215

10.  Esophageal cancer alters the expression of nuclear pore complex binding protein Hsc70 and eIF5A-1.

Authors:  Mehdi Moghanibashi; Ferdous Rastgar Jazii; Zahra-Soheila Soheili; Maryam Zare; Aliasghar Karkhane; Kazem Parivar; Parisa Mohamadynejad
Journal:  Funct Integr Genomics       Date:  2013-03-29       Impact factor: 3.410

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