Literature DB >> 17301743

Structural biology: analysis of protein-folding cooperativity.

Zheng Zhou1, Yawen Bai.   

Abstract

The folding of small proteins has been assumed to be an all-or-none process that involves high cooperativity within the structure and substantial kinetic-energy barriers. Sadqi et al. claim that the small re-engineered protein Naf-BBL unfolds without significant cooperativity or kinetic hindrance, a conclusion that is based on calculation of a broad distribution of midpoint thermal-transition temperatures measured by the nuclear magnetic resonance (NMR) chemical shifts of 158 protons. We find that all of the unprocessed melting curves can be fitted to the same two-state global unfolding when uncertainties in the experimental data are taken into account. We conclude that the authors' melting data for Naf-BBL remain consistent with the all-or-none process.

Entities:  

Mesh:

Substances:

Year:  2007        PMID: 17301743     DOI: 10.1038/nature05644

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   49.962


  9 in total

Review 1.  Repeat-protein folding: new insights into origins of cooperativity, stability, and topology.

Authors:  Ellen Kloss; Naomi Courtemanche; Doug Barrick
Journal:  Arch Biochem Biophys       Date:  2007-09-15       Impact factor: 4.013

2.  Cooperative folding kinetics of BBL protein and peripheral subunit-binding domain homologues.

Authors:  Wookyung Yu; Kwanghoon Chung; Mookyung Cheon; Muyoung Heo; Kyou-Hoon Han; Sihyun Ham; Iksoo Chang
Journal:  Proc Natl Acad Sci U S A       Date:  2008-02-12       Impact factor: 11.205

Review 3.  Mechanisms of protein folding.

Authors:  Ylva Ivarsson; Carlo Travaglini-Allocatelli; Maurizio Brunori; Stefano Gianni
Journal:  Eur Biophys J       Date:  2008-01-09       Impact factor: 1.733

Review 4.  An expanding arsenal of experimental methods yields an explosion of insights into protein folding mechanisms.

Authors:  Alice I Bartlett; Sheena E Radford
Journal:  Nat Struct Mol Biol       Date:  2009-06       Impact factor: 15.369

5.  Observation of two families of folding pathways of BBL.

Authors:  Jue Fan; Mojie Duan; Da-Wei Li; Hao Wu; Haijun Yang; Li Han; Shuanghong Huo
Journal:  Biophys J       Date:  2011-05-18       Impact factor: 4.033

6.  Theory for protein folding cooperativity: helix bundles.

Authors:  Kingshuk Ghosh; K A Dill
Journal:  J Am Chem Soc       Date:  2009-02-18       Impact factor: 15.419

7.  Probing the folding transition state of ubiquitin mutants by temperature-jump-induced downhill unfolding.

Authors:  Hoi Sung Chung; Ali Shandiz; Tobin R Sosnick; Andrei Tokmakoff
Journal:  Biochemistry       Date:  2008-12-30       Impact factor: 3.162

8.  Direct observation of barrier-limited folding of BBL by single-molecule fluorescence resonance energy transfer.

Authors:  Fang Huang; Liming Ying; Alan R Fersht
Journal:  Proc Natl Acad Sci U S A       Date:  2009-09-11       Impact factor: 11.205

9.  Interaction Networks in Protein Folding via Atomic-Resolution Experiments and Long-Time-Scale Molecular Dynamics Simulations.

Authors:  Lorenzo Sborgi; Abhinav Verma; Stefano Piana; Kresten Lindorff-Larsen; Michele Cerminara; Clara M Santiveri; David E Shaw; Eva de Alba; Victor Muñoz
Journal:  J Am Chem Soc       Date:  2015-05-12       Impact factor: 15.419

  9 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.