Literature DB >> 1729716

An rbcL sequence from a Miocene Taxodium (bald cypress).

P S Soltis1, D E Soltis, C J Smiley.   

Abstract

During the past decade, ancient DNAs from both animals and plants have been successfully extracted and analyzed. Recently, the age of DNA that can be recovered and sequenced was increased manyfold by the amplification and sequencing of a DNA fragment from a Magnolia fossil obtained from the Miocene Clarkia deposit (17-20 million yr old). However, the validity of this report has been questioned based on models predicting that DNA should be completely degraded after 4 million yr. We report here the successful amplification, sequencing, and analysis of a 1320-base-pair portion of the chloroplast gene rbcL from a Miocene Taxodium specimen, also from the Clarkia site. These data not only validate the earlier report of sequence data for a Magnolia species from the same site but also suggest that it may be possible to isolate and sequence DNAs routinely from the Clarkia deposit. The ability to recover and sequence DNAs of such age offers enormous research possibilities in the areas of molecular evolution, biogeography, and systematics.

Entities:  

Mesh:

Substances:

Year:  1992        PMID: 1729716      PMCID: PMC48255          DOI: 10.1073/pnas.89.1.449

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  14 in total

1.  Miocene DNA sequences - a dream come true?

Authors:  S Pääbo; A C Wilson
Journal:  Curr Biol       Date:  1991-02       Impact factor: 10.834

2.  Sequence of the gene for the large subunit of ribulose 1,5-bisphosphate carboxylase from a gymnosperm, Douglas fir.

Authors:  V D Hipkins; C H Tsai; S H Strauss
Journal:  Plant Mol Biol       Date:  1990-09       Impact factor: 4.076

3.  Amplification and analysis of Miocene plant fossil DNA.

Authors:  E M Golenberg
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  1991-09-30       Impact factor: 6.237

4.  Chloroplast DNA sequence from a miocene Magnolia species.

Authors:  E M Golenberg; D E Giannasi; M T Clegg; C J Smiley; M Durbin; D Henderson; G Zurawski
Journal:  Nature       Date:  1990-04-12       Impact factor: 49.962

Review 5.  Construction of phylogenetic trees.

Authors:  W M Fitch; E Margoliash
Journal:  Science       Date:  1967-01-20       Impact factor: 47.728

6.  The Nature of Nucleotide Sequence Divergence between Barley and Maize Chloroplast DNA.

Authors:  G Zurawski; M T Clegg; A H Brown
Journal:  Genetics       Date:  1984-04       Impact factor: 4.562

7.  A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences.

Authors:  M Kimura
Journal:  J Mol Evol       Date:  1980-12       Impact factor: 2.395

8.  Evolutionary trees from DNA sequences: a maximum likelihood approach.

Authors:  J Felsenstein
Journal:  J Mol Evol       Date:  1981       Impact factor: 2.395

9.  Rate of depurination of native deoxyribonucleic acid.

Authors:  T Lindahl; B Nyberg
Journal:  Biochemistry       Date:  1972-09-12       Impact factor: 3.162

10.  DNA sequences from the quagga, an extinct member of the horse family.

Authors:  R Higuchi; B Bowman; M Freiberger; O A Ryder; A C Wilson
Journal:  Nature       Date:  1984 Nov 15-21       Impact factor: 49.962

View more
  19 in total

1.  Structural biopolymer preservation in Miocene leaf fossils from the Clarkia site, northern Idaho.

Authors:  G A Logan; J J Boon; G Eglinton
Journal:  Proc Natl Acad Sci U S A       Date:  1993-03-15       Impact factor: 11.205

Review 2.  Ancient DNA.

Authors:  Eske Willerslev; Alan Cooper
Journal:  Proc Biol Sci       Date:  2005-01-07       Impact factor: 5.349

3.  Molecular phytogeny of conifers using RFLP analysis of PCR-amplified specific chloroplast genes.

Authors:  Y Tsumura; K Yoshimura; N Tomaru; K Ohba
Journal:  Theor Appl Genet       Date:  1995-12       Impact factor: 5.699

4.  Problems of reproducibility--does geologically ancient DNA survive in amber-preserved insects?

Authors:  J J Austin; A J Ross; A B Smith; R A Fortey; R H Thomas
Journal:  Proc Biol Sci       Date:  1997-04-22       Impact factor: 5.349

5.  Phylogeny and staminal evolution of Salvia (Lamiaceae, Nepetoideae) in East Asia.

Authors:  Guo-Xiong Hu; Atsuko Takano; Bryan T Drew; En-De Liu; Douglas E Soltis; Pamela S Soltis; Hua Peng; Chun-Lei Xiang
Journal:  Ann Bot       Date:  2018-09-24       Impact factor: 4.357

Review 6.  Chloroplast gene sequences and the study of plant evolution.

Authors:  M T Clegg
Journal:  Proc Natl Acad Sci U S A       Date:  1993-01-15       Impact factor: 11.205

7.  Extending the scope of Darwin's 'abominable mystery': integrative approaches to understanding angiosperm origins and species richness.

Authors:  Ofir Katz
Journal:  Ann Bot       Date:  2018-01-25       Impact factor: 4.357

8.  Protein kinase C (PKC) activity and PKC messenger RNAs in human pituitary adenomas.

Authors:  L Jin; T Maeda; W F Chandler; R V Lloyd
Journal:  Am J Pathol       Date:  1993-02       Impact factor: 4.307

Review 9.  DNA in wheat seeds from European archaeological sites.

Authors:  T A Brown; R G Allaby; K A Brown; K O'Donoghue; R Sallares
Journal:  Experientia       Date:  1994-06-15

10.  Phylogenetic resolution within the Elephantidae using fossil DNA sequence from the American mastodon (Mammut americanum) as an outgroup.

Authors:  H Yang; E M Golenberg; J Shoshani
Journal:  Proc Natl Acad Sci U S A       Date:  1996-02-06       Impact factor: 11.205

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.