Literature DB >> 8421667

Chloroplast gene sequences and the study of plant evolution.

M T Clegg1.   

Abstract

A large body of sequence data has accumulated for the chloroplast-encoded gene ribulose-1,5-biphosphate carboxylase/oxygenase (rbcL) as the result of a cooperative effort involving many laboratories. The data span all seed plants, including most major lineages from the angiosperms, and as such they provide an unprecedented opportunity to study plant evolutionary history. The full analysis of this large data set poses many problems and opportunities for plant evolutionary biologists and for biostatisticians.

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Year:  1993        PMID: 8421667      PMCID: PMC45662          DOI: 10.1073/pnas.90.2.363

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  25 in total

1.  Extensive variation in evolutionary rate of rbcL gene sequences among seed plants.

Authors:  J Bousquet; S H Strauss; A H Doerksen; R A Price
Journal:  Proc Natl Acad Sci U S A       Date:  1992-08-15       Impact factor: 11.205

2.  Chloroplast DNA sequence from a miocene Magnolia species.

Authors:  E M Golenberg; D E Giannasi; M T Clegg; C J Smiley; M Durbin; D Henderson; G Zurawski
Journal:  Nature       Date:  1990-04-12       Impact factor: 49.962

3.  Molecular evolution of the small subunit of ribulose bisphosphate carboxylase: nucleotide substitution and gene conversion.

Authors:  R B Meagher; S Berry-Lowe; K Rice
Journal:  Genetics       Date:  1989-12       Impact factor: 4.562

4.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

5.  Molecular evolution of chloroplast DNA sequences.

Authors:  S E Curtis; M T Clegg
Journal:  Mol Biol Evol       Date:  1984-07       Impact factor: 16.240

6.  The Nature of Nucleotide Sequence Divergence between Barley and Maize Chloroplast DNA.

Authors:  G Zurawski; M T Clegg; A H Brown
Journal:  Genetics       Date:  1984-04       Impact factor: 4.562

7.  An evaluation of the molecular clock hypothesis using mammalian DNA sequences.

Authors:  W H Li; M Tanimura; P M Sharp
Journal:  J Mol Evol       Date:  1987       Impact factor: 2.395

8.  Maize chloroplast DNA fragment encoding the large subunit of ribulosebisphosphate carboxylase.

Authors:  D M Coen; J R Bedbrook; L Bogorad; A Rich
Journal:  Proc Natl Acad Sci U S A       Date:  1977-12       Impact factor: 11.205

9.  Carnivorous plants: phylogeny and structural evolution.

Authors:  V A Albert; S E Williams; M W Chase
Journal:  Science       Date:  1992-09-11       Impact factor: 47.728

10.  Evidence for higher rates of nucleotide substitution in rodents than in man.

Authors:  C I Wu; W H Li
Journal:  Proc Natl Acad Sci U S A       Date:  1985-03       Impact factor: 11.205

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  32 in total

Review 1.  Cross-reactivity of plant and animal allergens.

Authors:  R W Weber
Journal:  Clin Rev Allergy Immunol       Date:  2001-10       Impact factor: 8.667

2.  The evolution of plant nuclear genes.

Authors:  M T Clegg; M P Cummings; M L Durbin
Journal:  Proc Natl Acad Sci U S A       Date:  1997-07-22       Impact factor: 11.205

3.  East Gondwana ancestry of the sunflower alliance of families.

Authors:  K Bremer; M H Gustafsson
Journal:  Proc Natl Acad Sci U S A       Date:  1997-08-19       Impact factor: 11.205

4.  Retrotransposon sequence variation in four asexual plant species.

Authors:  T Roderick Docking; Fabienne E Saadé; Miranda C Elliott; Daniel J Schoen
Journal:  J Mol Evol       Date:  2006-03-17       Impact factor: 2.395

5.  Discoveries in Rubisco (Ribulose 1,5-bisphosphate carboxylase/oxygenase): a historical perspective.

Authors:  Archie R Portis; Martin A J Parry
Journal:  Photosynth Res       Date:  2007-07-31       Impact factor: 3.573

6.  Phylogenetic relationships within Hevea brasiliensis as deduced from a polymorphic mitochondrial DNA region.

Authors:  H Luo; M Boutry
Journal:  Theor Appl Genet       Date:  1995-11       Impact factor: 5.699

7.  Plant mitochondrial nucleic acid sequences as a tool for phylogenetic analysis.

Authors:  R Hiesel; A von Haeseler; A Brennicke
Journal:  Proc Natl Acad Sci U S A       Date:  1994-01-18       Impact factor: 11.205

8.  Rubisco surprises in dinoflagellates.

Authors:  J D Palmer
Journal:  Plant Cell       Date:  1996-03       Impact factor: 11.277

9.  Phylogenetic affinities of the grasses to other monocots as revealed by molecular analysis of chloroplast DNA.

Authors:  H Katayama; Y Ogihara
Journal:  Curr Genet       Date:  1996-05       Impact factor: 3.886

10.  Diversity of the ribulose bisphosphate carboxylase/oxygenase form I gene (rbcL) in natural phytoplankton communities.

Authors:  S L Pichard; L Campbell; J H Paul
Journal:  Appl Environ Microbiol       Date:  1997-09       Impact factor: 4.792

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