Literature DB >> 2325772

Chloroplast DNA sequence from a miocene Magnolia species.

E M Golenberg1, D E Giannasi, M T Clegg, C J Smiley, M Durbin, D Henderson, G Zurawski.   

Abstract

DNA has been successfully extracted from several samples of preserved tissue, the oldest so far reported originating from a 13,000-year-old ground sloth. Both severe damage to the preserved DNA, primarily due to oxidation of the pyrimidines, has prevented the acquisition of sequence data from ancient samples except in a few cases. We report here the extraction of DNA from fossil leaf samples from the Miocene Clarkia deposit (17-20 Myr old), the amplification of an 820-base pair (bp) DNA fragment from the chloroplast gene rbcL from a fossil of the genus Magnolia, and its subsequent sequencing. The sequence was verified by comparison with published and unpublished rbcL sequences. These results extend our ability to analyse ancient DNA and may open new avenues into problems in palaeobotany, biogeography, and in the calibration of mutation rates.

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Year:  1990        PMID: 2325772     DOI: 10.1038/344656a0

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   49.962


  42 in total

Review 1.  Developments in fungal taxonomy.

Authors:  J Guarro; A M Stchigel
Journal:  Clin Microbiol Rev       Date:  1999-07       Impact factor: 26.132

2.  'Ancient' DNA in the resting egg bank of a microcrustacean can serve as a palaeolimnological database.

Authors:  Petra A Limburg; Lawrence J Weider
Journal:  Proc Biol Sci       Date:  2002-02-07       Impact factor: 5.349

3.  Structural biopolymer preservation in Miocene leaf fossils from the Clarkia site, northern Idaho.

Authors:  G A Logan; J J Boon; G Eglinton
Journal:  Proc Natl Acad Sci U S A       Date:  1993-03-15       Impact factor: 11.205

4.  Molecular phylogenetic inference from saber-toothed cat fossils of Rancho La Brea.

Authors:  D N Janczewski; N Yuhki; D A Gilbert; G T Jefferson; S J O'Brien
Journal:  Proc Natl Acad Sci U S A       Date:  1992-10-15       Impact factor: 11.205

5.  Relative rates of nucleotide substitution at the rbcL locus of monocotyledonous plants.

Authors:  B S Gaut; S V Muse; W D Clark; M T Clegg
Journal:  J Mol Evol       Date:  1992-10       Impact factor: 2.395

6.  Saving the "library of life".

Authors:  G Benford
Journal:  Proc Natl Acad Sci U S A       Date:  1992-11-15       Impact factor: 11.205

7.  Immunospecific albumin in fossil pack rat, porcupine and hyrax urine.

Authors:  J M Lowenstein; W N Rainey; J L Betancourt
Journal:  Naturwissenschaften       Date:  1991-01

Review 8.  Ancient DNA.

Authors:  Eske Willerslev; Alan Cooper
Journal:  Proc Biol Sci       Date:  2005-01-07       Impact factor: 5.349

9.  An rbcL sequence from a Miocene Taxodium (bald cypress).

Authors:  P S Soltis; D E Soltis; C J Smiley
Journal:  Proc Natl Acad Sci U S A       Date:  1992-01-01       Impact factor: 11.205

10.  Molecular analysis of the hot spot region related to length mutations in wheat chloroplast DNAs. I. Nucleotide divergence of genes and intergenic spacer regions located in the hot spot region.

Authors:  Y Ogihara; T Terachi; T Sasakuma
Journal:  Genetics       Date:  1991-11       Impact factor: 4.562

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