Literature DB >> 17289393

Folding of group II introns: a model system for large, multidomain RNAs?

Anna Marie Pyle1, Olga Fedorova, Christina Waldsich.   

Abstract

Group II introns are among the largest ribozymes in nature. They have a highly complex tertiary architecture that enables them to catalyze numerous processes, including self-splicing and transposition reactions that have probably contributed to the evolution of eukaryotic genomes. Biophysical analyses show that, despite their large size, these RNAs can fold to their native state through direct pathways that are populated by structurally defined intermediates. In addition, proteins have specific and important roles in this folding process. As a consequence, the study of the group II introns provides a valuable system for both exploring the driving forces behind the folding of multidomain RNA molecules and investigating ribonucleoprotein assembly.

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Year:  2007        PMID: 17289393     DOI: 10.1016/j.tibs.2007.01.005

Source DB:  PubMed          Journal:  Trends Biochem Sci        ISSN: 0968-0004            Impact factor:   13.807


  47 in total

1.  Contribution of base-pairing interactions between group II intron fragments during trans-splicing in vivo.

Authors:  Cecilia Quiroga; Lisa Kronstad; Christine Ritlop; Audrey Filion; Benoit Cousineau
Journal:  RNA       Date:  2011-10-27       Impact factor: 4.942

2.  Selective forces for the origin of spliceosomes.

Authors:  Matej Vesteg; Zuzana Sándorová; Juraj Krajčovič
Journal:  J Mol Evol       Date:  2012-03-11       Impact factor: 2.395

3.  A group II intron encodes a functional LAGLIDADG homing endonuclease and self-splices under moderate temperature and ionic conditions.

Authors:  Sahra-Taylor Mullineux; Maria Costa; Gurminder S Bassi; François Michel; Georg Hausner
Journal:  RNA       Date:  2010-07-23       Impact factor: 4.942

Review 4.  The tertiary structure of group II introns: implications for biological function and evolution.

Authors:  Anna Marie Pyle
Journal:  Crit Rev Biochem Mol Biol       Date:  2010-06       Impact factor: 8.250

5.  DEAD-box protein facilitated RNA folding in vivo.

Authors:  Andreas Liebeg; Oliver Mayer; Christina Waldsich
Journal:  RNA Biol       Date:  2010-11-01       Impact factor: 4.652

Review 6.  RNA folding in living cells.

Authors:  Georgeta Zemora; Christina Waldsich
Journal:  RNA Biol       Date:  2010-11-01       Impact factor: 4.652

Review 7.  Activation of RIG-I-like receptor signal transduction.

Authors:  Annie M Bruns; Curt M Horvath
Journal:  Crit Rev Biochem Mol Biol       Date:  2011-11-08       Impact factor: 8.250

Review 8.  Structural Insights into the Mechanism of Group II Intron Splicing.

Authors:  Chen Zhao; Anna Marie Pyle
Journal:  Trends Biochem Sci       Date:  2017-04-21       Impact factor: 13.807

9.  Dissecting RNA folding by nucleotide analog interference mapping (NAIM).

Authors:  Christina Waldsich
Journal:  Nat Protoc       Date:  2008       Impact factor: 13.491

Review 10.  Structural insights into RNA splicing.

Authors:  Navtej Toor; Kevin S Keating; Anna Marie Pyle
Journal:  Curr Opin Struct Biol       Date:  2009-05-13       Impact factor: 6.809

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