Literature DB >> 17287987

Y-chromosome genetic structure in sub-Apennine populations of Central Italy by SNP and STR analysis.

Valerio Onofri1, Federica Alessandrini, Chiara Turchi, Barbara Fraternale, Loredana Buscemi, Mauro Pesaresi, Adriano Tagliabracci.   

Abstract

To define the Y-chromosome genetic structure in Apennine populations, 17 Y-chromosome short tandem repeats (Y-STRs) and 37 Y-single nucleotide polymorphisms (Y-SNPs) were typed in 162 subjects living in the upland area of the Marches (Central Italy). A total number of 155 haplotypes (haplotype diversity was 0.9994) and 14 SNP haplogroups were observed. Testing high-resolution Y-chromosome data sets, e.g. using Yfiler and SNPs, increases the discriminatory capacity in individual identification for forensic purposes. It is also useful in autochthonous population and micro-population studies to highlight the most informative loci for evolutionary aims.

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Year:  2007        PMID: 17287987     DOI: 10.1007/s00414-007-0153-y

Source DB:  PubMed          Journal:  Int J Legal Med        ISSN: 0937-9827            Impact factor:   2.791


  10 in total

1.  Clinal patterns of human Y chromosomal diversity in continental Italy and Greece are dominated by drift and founder effects.

Authors:  F Di Giacomo; F Luca; N Anagnou; G Ciavarella; R M Corbo; M Cresta; F Cucci; L Di Stasi; V Agostiano; M Giparaki; A Loutradis; C Mammi'; E N Michalodimitrakis; F Papola; G Pedicini; E Plata; L Terrenato; S Tofanelli; P Malaspina; A Novelletto
Journal:  Mol Phylogenet Evol       Date:  2003-09       Impact factor: 4.286

2.  Signature of recent historical events in the European Y-chromosomal STR haplotype distribution.

Authors:  Lutz Roewer; Peter J P Croucher; Sascha Willuweit; Tim T Lu; Manfred Kayser; Rüdiger Lessig; Peter de Knijff; Mark A Jobling; Chris Tyler-Smith; Michael Krawczak
Journal:  Hum Genet       Date:  2005-01-20       Impact factor: 4.132

3.  Y-chromosomal STR haplotypes and their applications to forensic and population studies in east Asia.

Authors:  Kyoung Don Kwak; Han Jun Jin; Dong Jik Shin; Jung Min Kim; Lutz Roewer; Michael Krawczak; Chris Tyler-Smith; Wook Kim
Journal:  Int J Legal Med       Date:  2005-04-27       Impact factor: 2.686

4.  Development of multiplex PCRs for evolutionary and forensic applications of 37 human Y chromosome SNPs.

Authors:  Valerio Onofri; Federica Alessandrini; Chiara Turchi; Mauro Pesaresi; Loredana Buscemi; Adriano Tagliabracci
Journal:  Forensic Sci Int       Date:  2006-02-10       Impact factor: 2.395

5.  Y-chromosomal STR haplotypes in a Northeast Italian population sample using 17plex loci PCR assay.

Authors:  Stefania Turrina; Renzo Atzei; Domenico De Leo
Journal:  Int J Legal Med       Date:  2005-11-19       Impact factor: 2.686

6.  Multiplex PCR development of Y-chromosomal biallelic polymorphisms for forensic application.

Authors:  Federica Alessandrini; Chiara Turchi; Valerio Onofri; Loredana Buscemi; Mauro Pesaresi; Adriano Tagliabracci
Journal:  J Forensic Sci       Date:  2005-05       Impact factor: 1.832

7.  Letter to the editor--nomenclature and allele repeat structure update for the Y-STR locus GATA H4.

Authors:  Julio J Mulero; Bruce Budowle; John M Butler; Leonor Gusmao
Journal:  J Forensic Sci       Date:  2006-05       Impact factor: 1.832

Review 8.  DNA Commission of the International Society of Forensic Genetics (ISFG): an update of the recommendations on the use of Y-STRs in forensic analysis.

Authors:  L Gusmão; J M Butler; A Carracedo; P Gill; M Kayser; W R Mayr; N Morling; M Prinz; L Roewer; C Tyler-Smith; P M Schneider
Journal:  Int J Legal Med       Date:  2006-07       Impact factor: 2.686

9.  Y-STR typing of an Austrian population sample using a 17-loci multiplex PCR assay.

Authors:  Burkhard Berger; Alexandra Lindinger; Harald Niederstätter; Petra Grubwieser; Walther Parson
Journal:  Int J Legal Med       Date:  2005-04-21       Impact factor: 2.686

10.  The genetic legacy of Paleolithic Homo sapiens sapiens in extant Europeans: a Y chromosome perspective.

Authors:  O Semino; G Passarino; P J Oefner; A A Lin; S Arbuzova; L E Beckman; G De Benedictis; P Francalacci; A Kouvatsi; S Limborska; M Marcikiae; A Mika; B Mika; D Primorac; A S Santachiara-Benerecetti; L L Cavalli-Sforza; P A Underhill
Journal:  Science       Date:  2000-11-10       Impact factor: 47.728

  10 in total
  11 in total

1.  Y-STR variation in Albanian populations: implications on the match probabilities and the genetic legacy of the minority claiming an Egyptian descent.

Authors:  Gianmarco Ferri; Sergio Tofanelli; Milena Alù; Luca Taglioli; Erjon Radheshi; Beatrice Corradini; Giorgio Paoli; Cristian Capelli; Giovanni Beduschi
Journal:  Int J Legal Med       Date:  2010-03-18       Impact factor: 2.686

2.  Population genetic analysis of haplotypes based on 17 short tandem repeat loci on Y chromosome in population sample from eastern Croatia.

Authors:  Branka Grsković; Gordan Mrsić; Andro Vrdoljak; Sinisa Merkas; Simun Andelinović
Journal:  Croat Med J       Date:  2010-06       Impact factor: 1.351

3.  Influences of history, geography, and religion on genetic structure: the Maronites in Lebanon.

Authors:  Marc Haber; Daniel E Platt; Danielle A Badro; Yali Xue; Mirvat El-Sibai; Maziar Ashrafian Bonab; Sonia C Youhanna; Stephanie Saade; David F Soria-Hernanz; Ajay Royyuru; R Spencer Wells; Chris Tyler-Smith; Pierre A Zalloua
Journal:  Eur J Hum Genet       Date:  2010-12-01       Impact factor: 4.246

4.  Analysis of Y-chromosomal SNP haplogroups and STR haplotypes in an Algerian population sample.

Authors:  C Robino; F Crobu; C Di Gaetano; A Bekada; S Benhamamouch; N Cerutti; A Piazza; S Inturri; C Torre
Journal:  Int J Legal Med       Date:  2007-10-02       Impact factor: 2.686

5.  Moors and Saracens in Europe: estimating the medieval North African male legacy in southern Europe.

Authors:  Cristian Capelli; Valerio Onofri; Francesca Brisighelli; Ilaria Boschi; Francesca Scarnicci; Mara Masullo; Gianmarco Ferri; Sergio Tofanelli; Adriano Tagliabracci; Leonor Gusmao; Antonio Amorim; Francesco Gatto; Mirna Kirin; Davide Merlitti; Maria Brion; Alejandro Blanco Verea; Valentino Romano; Francesco Cali; Vincenzo Pascali
Journal:  Eur J Hum Genet       Date:  2009-01-21       Impact factor: 4.246

6.  Croatian national reference Y-STR haplotype database.

Authors:  Gordan Mršić; Branka Gršković; Andro Vrdoljak; Maja Popović; Ivica Valpotić; Šimun Anđelinović; Vlastimil Stenzl; Edvard Ehler; Ludvik Urban; Gordana Lacković; Peter Underhill; Dragan Primorac
Journal:  Mol Biol Rep       Date:  2012-03-06       Impact factor: 2.316

7.  Y-chromosome R-M343 African lineages and sickle cell disease reveal structured assimilation in Lebanon.

Authors:  Marc Haber; Daniel E Platt; Simon Khoury; Danielle A Badro; Miguel Abboud; Chris Tyler-Smith; Pierre A Zalloua
Journal:  J Hum Genet       Date:  2010-10-28       Impact factor: 3.172

8.  The origin of Eastern European Jews revealed by autosomal, sex chromosomal and mtDNA polymorphisms.

Authors:  Avshalom Zoossmann-Diskin
Journal:  Biol Direct       Date:  2010-10-06       Impact factor: 4.540

9.  Understanding the Y chromosome variation in Korea--relevance of combined haplogroup and haplotype analyses.

Authors:  Myung Jin Park; Hwan Young Lee; Woo Ick Yang; Kyoung-Jin Shin
Journal:  Int J Legal Med       Date:  2012-05-09       Impact factor: 2.686

10.  Uniparental markers of contemporary Italian population reveals details on its pre-Roman heritage.

Authors:  Francesca Brisighelli; Vanesa Álvarez-Iglesias; Manuel Fondevila; Alejandro Blanco-Verea; Angel Carracedo; Vincenzo L Pascali; Cristian Capelli; Antonio Salas
Journal:  PLoS One       Date:  2012-12-10       Impact factor: 3.240

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