Literature DB >> 17276527

Biological consequences of dosage dependent gene regulatory systems.

James A Birchler1, Hong Yao, Siva Chudalayandi.   

Abstract

Chromatin and gene regulatory molecules tend to operate in multisubunit complexes in the process of controlling gene expression. Accumulating evidence suggests that varying the amount of any one member of such complexes will affect the function of the whole via the kinetics of assembly and other actions. In effect, they exhibit a "balance" among themselves in terms of the activity of the whole. When this fact is coupled with genetic and biological observations stretching back a century, a synthesis emerges that helps explain at least some aspects of a variety of phenomena including aneuploid syndromes, dosage compensation, quantitative trait genetics, regulatory gene evolution following polyploidization, the emergence of complexity in multicellular organisms, the genetic basis of evolutionary gradualism and potential implications for heterosis and co-evolving genes complexes involved with speciation. In this article we will summarize the evidence for this potential synthesis.

Mesh:

Year:  2007        PMID: 17276527      PMCID: PMC1975783          DOI: 10.1016/j.bbaexp.2006.12.002

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  37 in total

1.  Modeling gene and genome duplications in eukaryotes.

Authors:  Steven Maere; Stefanie De Bodt; Jeroen Raes; Tineke Casneuf; Marc Van Montagu; Martin Kuiper; Yves Van de Peer
Journal:  Proc Natl Acad Sci U S A       Date:  2005-03-30       Impact factor: 11.205

Review 2.  Dosage balance in gene regulation: biological implications.

Authors:  James A Birchler; Nicole C Riddle; Donald L Auger; Reiner A Veitia
Journal:  Trends Genet       Date:  2005-04       Impact factor: 11.639

3.  CHROMOSOMAL DUPLICATION AND MENDELIAN PHENOMENA IN DATURA MUTANTS.

Authors:  A F Blakeslee; J Belling; M E Farnham
Journal:  Science       Date:  1920-10-22       Impact factor: 47.728

4.  A trans-acting regulatory gene that inversely affects the expression of the white, brown and scarlet loci in Drosophila.

Authors:  L Rabinow; A T Nguyen-Huynh; J A Birchler
Journal:  Genetics       Date:  1991-10       Impact factor: 4.562

5.  An introgression analysis of quantitative trait loci that contribute to a morphological difference between Drosophila simulans and D. mauritiana.

Authors:  C C Laurie; J R True; J Liu; J M Mercer
Journal:  Genetics       Date:  1997-02       Impact factor: 4.562

6.  The evolution of postzygotic isolation: accumulating Dobzhansky-Muller incompatibilities.

Authors:  H A Orr; M Turelli
Journal:  Evolution       Date:  2001-06       Impact factor: 3.694

7.  The genetic basis of dosage compensation of alcohol dehydrogenase-1 in maize.

Authors:  J A Birchler
Journal:  Genetics       Date:  1981-03       Impact factor: 4.562

8.  The hidden duplication past of Arabidopsis thaliana.

Authors:  Cedric Simillion; Klaas Vandepoele; Marc C E Van Montagu; Marc Zabeau; Yves Van de Peer
Journal:  Proc Natl Acad Sci U S A       Date:  2002-10-08       Impact factor: 11.205

9.  Dosage sensitivity and the evolution of gene families in yeast.

Authors:  Balázs Papp; Csaba Pál; Laurence D Hurst
Journal:  Nature       Date:  2003-07-10       Impact factor: 49.962

10.  Functional divergence of duplicated genes formed by polyploidy during Arabidopsis evolution.

Authors:  Guillaume Blanc; Kenneth H Wolfe
Journal:  Plant Cell       Date:  2004-06-18       Impact factor: 11.277

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  33 in total

1.  Extensive chromosomal variation in a recently formed natural allopolyploid species, Tragopogon miscellus (Asteraceae).

Authors:  Michael Chester; Joseph P Gallagher; V Vaughan Symonds; Ana Veruska Cruz da Silva; Evgeny V Mavrodiev; Andrew R Leitch; Pamela S Soltis; Douglas E Soltis
Journal:  Proc Natl Acad Sci U S A       Date:  2012-01-06       Impact factor: 11.205

2.  Ancient genome duplications during the evolution of kiwifruit (Actinidia) and related Ericales.

Authors:  Tao Shi; Hongwen Huang; Michael S Barker
Journal:  Ann Bot       Date:  2010-06-24       Impact factor: 4.357

3.  Comparative evolution of photosynthetic genes in response to polyploid and nonpolyploid duplication.

Authors:  Jeremy E Coate; Jessica A Schlueter; Adam M Whaley; Jeff J Doyle
Journal:  Plant Physiol       Date:  2011-02-02       Impact factor: 8.340

Review 4.  Gene and genome duplications: the impact of dosage-sensitivity on the fate of nuclear genes.

Authors:  Patrick P Edger; J Chris Pires
Journal:  Chromosome Res       Date:  2009       Impact factor: 5.239

Review 5.  Robustness and evolvability in the B-system of flower development.

Authors:  K Geuten; T Viaene; V F Irish
Journal:  Ann Bot       Date:  2011-03-25       Impact factor: 4.357

6.  Differentiation of the maize subgenomes by genome dominance and both ancient and ongoing gene loss.

Authors:  James C Schnable; Nathan M Springer; Michael Freeling
Journal:  Proc Natl Acad Sci U S A       Date:  2011-02-22       Impact factor: 11.205

7.  The flowering gene SINGLE FLOWER TRUSS drives heterosis for yield in tomato.

Authors:  Uri Krieger; Zachary B Lippman; Dani Zamir
Journal:  Nat Genet       Date:  2010-03-28       Impact factor: 38.330

8.  Species-specific positive selection of the male-specific lethal complex that participates in dosage compensation in Drosophila.

Authors:  Monica A Rodriguez; Danielle Vermaak; Joshua J Bayes; Harmit S Malik
Journal:  Proc Natl Acad Sci U S A       Date:  2007-09-18       Impact factor: 11.205

9.  Aneuploidy causes tissue-specific qualitative changes in global gene expression patterns in maize.

Authors:  Irina Makarevitch; Carolyn Harris
Journal:  Plant Physiol       Date:  2009-12-11       Impact factor: 8.340

10.  Buffering of segmental and chromosomal aneuploidies in Drosophila melanogaster.

Authors:  Per Stenberg; Lina E Lundberg; Anna-Mia Johansson; Patrik Rydén; Malin J Svensson; Jan Larsson
Journal:  PLoS Genet       Date:  2009-05-01       Impact factor: 5.917

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