Literature DB >> 17220173

Effects of genome-wide heterozygosity on a range of biomedically relevant human quantitative traits.

Harry Campbell1, Andrew D Carothers, Igor Rudan, Caroline Hayward, Zrinka Biloglav, Lovorka Barac, Marijana Pericic, Branka Janicijevic, Nina Smolej-Narancic, Ozren Polasek, Ivana Kolcic, James L Weber, Nicholas D Hastie, Pavao Rudan, Alan F Wright.   

Abstract

The dramatic changes in human population structure over the last 200 years have resulted in significant levels of outbreeding, which, in turn, is predicted to lead to increased levels of individual genetic diversity (genome-wide heterozygosity, h). To investigate possible effects of these large demographic changes on global health, we studied the effect of h, measured as relative heterozygosity, h(R), on 15 disease-related traits in four groups of individuals with widely differing ancestral histories (ranging from outbred to inbred) from the Dalmatian islands in Croatia. Higher levels of h(R), estimated using 1184 STR/indel markers, were found in the outbred group (P < 0.0001) and were associated with lower blood pressure (BP) and total/LDL cholesterol (P = 0.01 and 0.01, respectively) after controlling for other factors, with BP showing a strong sex effect (males P > 0.5 and females P = 0.002). These findings, if replicated, suggest that h(R) be considered as a genetic risk factor in genetic epidemiological studies on common disease traits. They are consistent with the well-known effects of heterosis (hybrid vigour) described when outcrossing animals and plants. Outbreeding resulting from urbanization and migration from traditional population subgroups may be leading to increasing h(R) and may have beneficial effects on a range of traits associated with human health and disease. Other traits, such as age at menarche, IQ and lifespan, which have been changing during the decades of urbanization, may also have been influenced by demographic factors.

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Year:  2007        PMID: 17220173     DOI: 10.1093/hmg/ddl473

Source DB:  PubMed          Journal:  Hum Mol Genet        ISSN: 0964-6906            Impact factor:   6.150


  54 in total

Review 1.  Regions of homozygosity and their impact on complex diseases and traits.

Authors:  Chee Seng Ku; Nasheen Naidoo; Shu Mei Teo; Yudi Pawitan
Journal:  Hum Genet       Date:  2010-11-23       Impact factor: 4.132

2.  "10001 Dalmatians:" Croatia launches its national biobank.

Authors:  Igor Rudan; Ana Marusić; Stipan Janković; Kresimir Rotim; Mladen Boban; Gordan Lauc; Ivica Grković; Zoran Dogas; Tatijana Zemunik; Zoran Vatavuk; Goran Bencić; Diana Rudan; Rosanda Mulić; Vjekoslav Krzelj; Janos Terzić; Drazen Stojanović; Dinko Puntarić; Ervina Bilić; Darko Ropac; Ariana Vorko-Jović; Ariana Znaor; Ranko Stevanović; Zrinka Biloglav; Ozren Polasek
Journal:  Croat Med J       Date:  2009-02       Impact factor: 1.351

3.  Legacy of mutiny on the Bounty: founder effect and admixture on Norfolk Island.

Authors:  Stuart Macgregor; Claire Bellis; Rod A Lea; Hannah Cox; Tom Dyer; John Blangero; Peter M Visscher; Lyn R Griffiths
Journal:  Eur J Hum Genet       Date:  2010-01       Impact factor: 4.246

4.  Runs of homozygosity in European populations.

Authors:  Ruth McQuillan; Anne-Louise Leutenegger; Rehab Abdel-Rahman; Christopher S Franklin; Marijana Pericic; Lovorka Barac-Lauc; Nina Smolej-Narancic; Branka Janicijevic; Ozren Polasek; Albert Tenesa; Andrew K Macleod; Susan M Farrington; Pavao Rudan; Caroline Hayward; Veronique Vitart; Igor Rudan; Sarah H Wild; Malcolm G Dunlop; Alan F Wright; Harry Campbell; James F Wilson
Journal:  Am J Hum Genet       Date:  2008-08-28       Impact factor: 11.025

5.  Quantifying realized inbreeding in wild and captive animal populations.

Authors:  U Knief; G Hemmrich-Stanisak; M Wittig; A Franke; S C Griffith; B Kempenaers; W Forstmeier
Journal:  Heredity (Edinb)       Date:  2015-01-14       Impact factor: 3.821

6.  Comparative assessment of methods for estimating individual genome-wide homozygosity-by-descent from human genomic data.

Authors:  Ozren Polasek; Caroline Hayward; Celine Bellenguez; Veronique Vitart; Ivana Kolcić; Ruth McQuillan; Vanja Saftić; Ulf Gyllensten; James F Wilson; Igor Rudan; Alan F Wright; Harry Campbell; Anne-Louise Leutenegger
Journal:  BMC Genomics       Date:  2010-02-25       Impact factor: 3.969

7.  Does genetic diversity predict health in humans?

Authors:  Hanne C Lie; Leigh W Simmons; Gillian Rhodes
Journal:  PLoS One       Date:  2009-07-27       Impact factor: 3.240

8.  High-pitched notes during vocal contests signal genetic diversity in ocellated antbirds.

Authors:  Yi-Men Araya-Ajoy; Johel Chaves-Campos; Elisabeth K V Kalko; J Andrew Dewoody
Journal:  PLoS One       Date:  2009-12-02       Impact factor: 3.240

9.  Human population structure, genome autozygosity and human health.

Authors:  Harry Campbell; Igor Rudan; Alan H Bittles; Alan F Wright
Journal:  Genome Med       Date:  2009-09-28       Impact factor: 11.117

10.  Concordant association of insulin degrading enzyme gene (IDE) variants with IDE mRNA, Abeta, and Alzheimer's disease.

Authors:  Minerva M Carrasquillo; Olivia Belbin; Fanggeng Zou; Mariet Allen; Nilufer Ertekin-Taner; Morad Ansari; Samantha L Wilcox; Mariah R Kashino; Li Ma; Linda H Younkin; Samuel G Younkin; Curtis S Younkin; Toros A Dincman; Melissa E Howard; Chanley C Howell; Chloe M Stanton; Christopher M Watson; Michael Crump; Veronique Vitart; Caroline Hayward; Nicholas D Hastie; Igor Rudan; Harry Campbell; Ozren Polasek; Kristelle Brown; Peter Passmore; David Craig; Bernadette McGuinness; Stephen Todd; Patrick G Kehoe; David M Mann; A David Smith; Helen Beaumont; Donald Warden; Clive Holmes; Reinhard Heun; Heike Kölsch; Noor Kalsheker; V Shane Pankratz; Dennis W Dickson; Neill R Graff-Radford; Ronald C Petersen; Alan F Wright; Steven G Younkin; Kevin Morgan
Journal:  PLoS One       Date:  2010-01-19       Impact factor: 3.240

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